| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DET0331 |
|---|
| Symbol | |
|---|
| ID | 3230397 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dehalococcoides ethenogenes 195 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002936 |
|---|
| Strand | - |
|---|
| Start bp | 315200 |
|---|
| End bp | 316135 |
|---|
| Gene Length | 936 bp |
|---|
| Protein Length | 311 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 637119898 |
|---|
| Product | cation efflux family protein |
|---|
| Protein accession | YP_181078 |
|---|
| Protein GI | 57234928 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0053] Predicted Co/Zn/Cd cation transporters |
|---|
| TIGRFAM ID | [TIGR01297] cation diffusion facilitator family transporter |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCTACCA GAAAAACCAG GGCGGCTTCA TTTTCGATAG CTTCTAACTC AACGCTTATA
GTTATGAAGG CGGCGGTCGG TTTTGTTACC GGCAGCGTGA GTATACTAGC AGAAGCTATC
CACAGCACTC TGGATCTGGT AGCCGCAGTT ATCGCCTTTT TCGGCGTCAA AGCCTCTGAC
AAACCGGCAG ATGCTACCCA CCCTTACGGA CATGGCAAGT GGGAAAACGT AAGTGGCACA
GTAGAAGCAG TCCTCATCTT CGTAGCCGCT ATCTGGATTA TCTACGAGGC AATAAACAGG
CTTATAGAGG GCTCTGCCCC TGAGATGCTG GAATGGGGCG TGGTAATTAT GGGCGTATCC
GTAGTTGCCA ATACCTTAGT CTCCAGTTAC CTGAAAAAGA TAGCCCGCGA GACTGATTCA
GTGGCCCTAG AGGCAGACGC CTCACACCTC ACCACAGATG TAATCACCTC AGCCGGAGTA
CTGCTGGGTC TGCTACTGGC AAAACTGACC GGCTGGAGCG TACTTGACCC CATCGTAGCC
TTGCTGGTAG CCCTGCTTAT CATCAAAGCC GCCTGGGATA TACTCAACAA GTCTTTCGGG
GCGCTGGTAG ATGCCCGTTT GCCCAAAGAA GAAGTAGATG CCATCAGCAG TTTGATAAAT
GAACATACCT CAAAACTGGT GGAGTTTCAC AACCTGCGCA CCCGCAAAGC CGGCAGTTAC
CGGTATGTAG ACCTGCATCT GGTTATGCCC AAAACGCTTT CGGTGGAAAA AGCCCACTCC
ATATGTGACC ATCTGGAAAA AGACCTCAAA GATAAACTGA AAATAGACTA CGTGACTATC
CACGTAGAAC CCTGCACCGA GGAAAACTGC CCCGAATGCC AGATAAACTG TAAGAAACGC
CCTTCGGACT TAGCTAATCC CGAAAATACC CCGTAA
|
|---|
| Protein sequence | MATRKTRAAS FSIASNSTLI VMKAAVGFVT GSVSILAEAI HSTLDLVAAV IAFFGVKASD
KPADATHPYG HGKWENVSGT VEAVLIFVAA IWIIYEAINR LIEGSAPEML EWGVVIMGVS
VVANTLVSSY LKKIARETDS VALEADASHL TTDVITSAGV LLGLLLAKLT GWSVLDPIVA
LLVALLIIKA AWDILNKSFG ALVDARLPKE EVDAISSLIN EHTSKLVEFH NLRTRKAGSY
RYVDLHLVMP KTLSVEKAHS ICDHLEKDLK DKLKIDYVTI HVEPCTEENC PECQINCKKR
PSDLANPENT P
|
|---|
| |