Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | DET0166 |
Symbol | |
ID | 3230441 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dehalococcoides ethenogenes 195 |
Kingdom | Bacteria |
Replicon accession | NC_002936 |
Strand | + |
Start bp | 160181 |
End bp | 161005 |
Gene Length | 825 bp |
Protein Length | 274 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 637119733 |
Product | ISDet2, transposase orfB |
Protein accession | YP_180914 |
Protein GI | 57234972 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG2801] Transposase and inactivated derivatives |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.101481 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGGAGTTTG CCAGGGGAAA TCTTGGGCTC AGTGAAAGAA GAGCTTGTCT GCTTGTCGGT ATTTCGCCAT CCGCCTACCG CTACAAGCCG AAACTAGACG ATGATCTGGC CTTGCGCCAG CGGTTACGGG ATCTGGCCGG GGAGCGGAAG CGCTTTGGCA GCCCGCGGCT CCACATTATG CTTAAACGGG AAGGACTGGT GATCAATCAC AAGCGGACCG AGCGAATCTA CAAAGAAGAG GGATTGGCGT TAAGAAGAAA ACGCAAACGC AAAGGAACTG CCGTTAATCG AATCATATTG CCGGTGCCCG ATAGGCCTAA CCAAAGATGG AGCATGGACT TCGTTTCTGA TTCCACCGTC ACCGGGAGAC GCTTCAGGAC ACTGACCATC GTCGATGACT TCACCCGGGA ATGCCCAGCG ATCGAAGTGG ATACATCTCT CGGTGGCGCC AGGGTGGTGA GTGTCCTGGA AAGGTTGGCT GAGACTCGAG GCTTGCCCGA AGTCATCACT ATCGACAATG GACCTGAGTT CGCCGGCCGG GCGCTTGATG AATGGGCTTA TCGGCGGGGT GTAAAACTCA ATTTCATACG GCCAGGCAAA CCTATAGAAA ATGCCTTCGC CGAGAGCTTT AACGGTAGAT TCAGGGACGA ATGCCTGAAT GAAAACTGGT TCATGAGCTT GAAACAAGCC CGGGAAATCA TCGAGGATTG GAGGATCGAC TATAACGAAG TCAGGCCACA CACTTCATTG AAAGGTCAAA CACCTCAGGA GTATGCTGAG GCAAATTCTG GACTCTACTC CGGAATGCTA CTAAAGGTGG GGTAA
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Protein sequence | MEFARGNLGL SERRACLLVG ISPSAYRYKP KLDDDLALRQ RLRDLAGERK RFGSPRLHIM LKREGLVINH KRTERIYKEE GLALRRKRKR KGTAVNRIIL PVPDRPNQRW SMDFVSDSTV TGRRFRTLTI VDDFTRECPA IEVDTSLGGA RVVSVLERLA ETRGLPEVIT IDNGPEFAGR ALDEWAYRRG VKLNFIRPGK PIENAFAESF NGRFRDECLN ENWFMSLKQA REIIEDWRID YNEVRPHTSL KGQTPQEYAE ANSGLYSGML LKVG
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