Gene DET0032 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDET0032 
Symbol 
ID3229087 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDehalococcoides ethenogenes 195 
KingdomBacteria 
Replicon accessionNC_002936 
Strand
Start bp28782 
End bp29732 
Gene Length951 bp 
Protein Length316 aa 
Translation table11 
GC content48% 
IMG OID637119602 
Productcation efflux family protein 
Protein accessionYP_180787 
Protein GI57233625 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1230] Co/Zn/Cd efflux system component 
TIGRFAM ID[TIGR01297] cation diffusion facilitator family transporter 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCCCCCG TCTCAAGTAA AAAAACTACT TCTGATAAGC AAATGCCGGT CAGCAAAAAA 
CTGAAGCTGG GAATCCTGTT TTCCGGCATT ATCCTCCTGG CCGAATTTAT CGGCGCTCTG
GTATCTAACA GTCTGGCCCT GCTAAGCGAT GCCGGGCATG TCCTGACAGA TGTTTTAGCC
CTTTCCCTAA GCTATTTTGC CTTAATGCAG GCCAAACGCC CTTCCAACTT TAAAATGACC
TTCGGATACC ACCGGATAGG TGTTCTGGTG GCTATTTTAA ACTCCATAAG CCTTATCGGC
ATTGCCGTTT TTATTTTTTA CGAATCTTTC CAGCGTTTTC AGAACCCTCC GGAAATAAAT
GCCGGGCTGG TTTTGCCGGT TGCCCTGCTG GGTCTGGCAA CTAATCTCAC GGTTGCTTTG
ATACTGCACC GTGAGCAAAA AGAAAACCTG AATATCAAAA GCGCATTCTG GCACGCCGCC
GGTGACGCTC TGGCTTCGGT GGGGGTTATC ATAAGTGCGG TGGTAATAAT AATCAGCGGC
AATTATCTGG CGGACATAGT TGTCAGTATA ATTATCGGCC TGATTATCAG CCTGGGAGGT
GTAAATATTT TCCGCCAGGG TCTGAGGGTG ATACTGGAAG CCAGCCCCAA AGATATAAAC
CTAAACCAGC TGGCTGATTC AGTAAAAACC ATACCTGGGG TAAAAGACTT TCATCATATC
CACATCTGGA GTATCAGCCC CGAAATCCAC GCCCTTTCCG CCCATGTGCT GATAGACGAC
TGCCCCGTAA GCCAGGCAGA TGATATCCGC CAGCATATAG AAACCATTTT GAAAGAAAGC
TTTGCCCTAA GCCATGTCAC CCTCCAGATG GAGTGCCAGG TTTGCCGGAC AAACGATATC
CTCTGCCAGC TGGAAATAGA ACAGAAACCT CACTTACATA AACACCATTA A
 
Protein sequence
MSPVSSKKTT SDKQMPVSKK LKLGILFSGI ILLAEFIGAL VSNSLALLSD AGHVLTDVLA 
LSLSYFALMQ AKRPSNFKMT FGYHRIGVLV AILNSISLIG IAVFIFYESF QRFQNPPEIN
AGLVLPVALL GLATNLTVAL ILHREQKENL NIKSAFWHAA GDALASVGVI ISAVVIIISG
NYLADIVVSI IIGLIISLGG VNIFRQGLRV ILEASPKDIN LNQLADSVKT IPGVKDFHHI
HIWSISPEIH ALSAHVLIDD CPVSQADDIR QHIETILKES FALSHVTLQM ECQVCRTNDI
LCQLEIEQKP HLHKHH