| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DET0030 |
|---|
| Symbol | trkA |
|---|
| ID | 3229089 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dehalococcoides ethenogenes 195 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002936 |
|---|
| Strand | - |
|---|
| Start bp | 27129 |
|---|
| End bp | 28493 |
|---|
| Gene Length | 1365 bp |
|---|
| Protein Length | 454 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 637119600 |
|---|
| Product | potassium transporter peripheral membrane component |
|---|
| Protein accession | YP_180785 |
|---|
| Protein GI | 57233627 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0569] K+ transport systems, NAD-binding component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTTTATTG TGATTGCCGG CGGCGGCACG GTAGGTTTTA ATATAGCCTC CATGCTGGTC
GTAGAAGACC ACGAAGTGGT AGTTATTGAA CAGTCTGAAA CAGCTGTTGA ATACCTTAAC
CGGCAGCTGG ACATTAAAAC TATCTTCGGC AATGCCGCCA TTCCACGGAT ACTGCGTGAT
GCCGAAGTTC AACGGGCAGA CCTGGTTTTA GCGGTAACAG ACCGGGACGA AACCAACATG
GTAATCTGCT TCATAGCCAA AGAAATGGGG GCTTCCACTA CCGCCGCCCG TATCCGCAAC
TCCGAATACA CCGGCTATTT TATACCTCCG GCCAAATCCA CCCTGTCTGC CAGACGGATT
ATCCGCCCCA AGTCACTGGG TATAGACGTC TTTATAAACC CCGAAGTTGA AATGGCCCGC
GAAATACTGG GTATTTTGTC CAGTTTTTAC TCTACCCCGG TGGAACAGCT GGCTAACGGT
CTGGTTCAGA TACGCAACTT TACTATTGAA GGCTCACCCA TGTCCGGCAA GACCCTGAGC
GAGCTTAATT TTACCAAGCC CTGCGTGGTA GCTTCCATCG CCCGGAAAGA AGAACTGCTG
ATACCCCAGC CTGAGCTGGT TTTGGAAGAA GAAGATGTCC TTTACCTGGT GGCCGAACGT
GACAATATGG ACCACCTGGG GCGGATGTTC AGCGCCATTC AGCGCCCGGC CCACAGCGTC
TTCATACTGG GCGGCAGCCA GATAGGTTTA CTGGTAGCCG AAGGGCTGGC AGACCATGAC
GTTGGTGTAA AACTGATAGA ACCTGACGAG GAAAAAAGCC AGAAAGCCGC TATCCGGCTG
GAAAAAGCGG TGGTCCTGAG GGGAGACCCC ACTGACCGGG ATTTCTTGAC CGAACAGGGC
GTGCCTTCGG CTGATGCTTT TGTAGCCACT ACCGAAAATG ACGAGTTCAA TATTTTAAGC
TGCCTGGTAG CCAAAAATCT GGGGGTAGAC CGCAGCCTTA GTGTTATCAA CAAGCCTTCT
TATATACCCC TGGCTGAAGC GGTGGATATA GATGTGGCCG GTTCTCCGGC CATTATTACC
GCCCGCAAGA TAGCTCACTT TGTGCTTTCC GGCGGAGCTA TTGCGGCCGC ACTGCTGGAA
AGCGGCCAGC TGGAGGCAGT GGAATTTGTA GTAAGCCCGC AGGCCAGCAT TATAAACCAG
AAGGTAAACC AGCTGGATCT TCCCAAAGAA GCCGTTATCG GGGCGGTTGT CCAGAATAAC
CAGGTTATTA TTCCCCCTGA TGAAGCCGTT ATCCATGGCG GAGACCATGT TATTGTAGTC
TCCCAGCTAA ACGTTCTGCA TGACGTGGAG AAGCTGTTTA AATAA
|
|---|
| Protein sequence | MFIVIAGGGT VGFNIASMLV VEDHEVVVIE QSETAVEYLN RQLDIKTIFG NAAIPRILRD
AEVQRADLVL AVTDRDETNM VICFIAKEMG ASTTAARIRN SEYTGYFIPP AKSTLSARRI
IRPKSLGIDV FINPEVEMAR EILGILSSFY STPVEQLANG LVQIRNFTIE GSPMSGKTLS
ELNFTKPCVV ASIARKEELL IPQPELVLEE EDVLYLVAER DNMDHLGRMF SAIQRPAHSV
FILGGSQIGL LVAEGLADHD VGVKLIEPDE EKSQKAAIRL EKAVVLRGDP TDRDFLTEQG
VPSADAFVAT TENDEFNILS CLVAKNLGVD RSLSVINKPS YIPLAEAVDI DVAGSPAIIT
ARKIAHFVLS GGAIAAALLE SGQLEAVEFV VSPQASIINQ KVNQLDLPKE AVIGAVVQNN
QVIIPPDEAV IHGGDHVIVV SQLNVLHDVE KLFK
|
|---|
| |