| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DET0005 |
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| Symbol | relA |
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| ID | 3229138 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dehalococcoides ethenogenes 195 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002936 |
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| Strand | - |
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| Start bp | 6013 |
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| End bp | 8199 |
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| Gene Length | 2187 bp |
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| Protein Length | 728 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 637119575 |
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| Product | GTP pyrophosphokinase |
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| Protein accession | YP_180760 |
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| Protein GI | 57233675 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0317] Guanosine polyphosphate pyrophosphohydrolases/synthetases |
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| TIGRFAM ID | [TIGR00691] (p)ppGpp synthetase, RelA/SpoT family
[TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAATTCG CTGATCTTAA AGAAAAGGCC TCCAAATACC TTCCTCCGGA AAAACTGGTT
TTTCTGGAGG AAGCCTATAA CTATGCCGCC GCAGCCCACA CCGGCCAGAT GCGGAAATCC
GGCGAACCCT TTATTGAACA CCCCTTAAAC GTGGCCATAA CTCTGGCTGA CCTCCAGCTG
GACTCGGCCA CCCTGGCGGC CGCTCTGCTC CATGACGTCC CCGAAGATGC CCATATCAGC
CTGGAGCAGA TAGAAAAAAA ATTCGGGGCA GACGTAGCCA AACTGGTAGA CGGGGTCACC
AAGCTGAGCA AGCTGGCACT TGGCCCCGGC ATAGAAGATG CCCGCCGCCC CGGCGGCAAT
GCCAGCCTGC GTCAGGCTGA AAACCTGCGT AAAATGCTGG TGGCCATGTC CGAAGATTTG
CGGGTGGTCT TTATAAAACT GGCAGACCGC TTTCACAATA TGCGCACCCT TCAGGCACTT
TCGGCTGAAA AACGCCGCAG CATAGCCAAG GAAACTATGG AAATCTACGC CCCCCTTGCT
CACCGCCTGG GCATATGGGA GCTGAAATGG CAGCTTGAAG ACCTGGCCTT CCGTTACCTT
GACCCCCGCC ATTACCGCCA GGTAGCCAAC CTAGTAGATT CAAAACTTGC CCAGCGCAAA
AATTATATTG AACACGTCAG TGCCATTCTT CAGAGCGAAT TTGAAAAAAA CGGGCTGAAG
GTGGAACTCT CCGGCCGCCC CAAACACCTT TACAGCATTT ATCAGAAAAT GGAAAAATAT
GCCTCCCAGG GCAAACAGTT TGAAGATATT TATGACGTAC TCGCCCTGAG GGTGCTGGTA
AATGACATAC CGGACTGTTA CCATGCCATA GGCATTGTCC ACAGTTTGTG GCACCCCATA
CCGGGTGCGT TTGATGATTA TATAGCCAAC CCCAAACCGA ACGGCTATCA GTCCCTGCAT
ACCGCCGTTA TGAGTTTAGG CACTACCCCG CTTGAGGTTC AGGTACGCAC TTACCAGATG
CACCATATTG CCGAATACGG TGTGGCCGCC CACTGGCGTT ACAAAACCGC CGGTAAAGAA
GACGTAAACT TTGAAGACCG TATCGGCTGG CTGAGACAGC TTATTGAGTG GCACCGTGAT
ATGCGCGGCG CCGAAGAATT TCTGGAATCC GTCAAGACCG ATATTTTCAA CGACCAGGTC
TTTGTCTTTA CCCCCAAAGG CGAAATAAAA GATTTGGCCA AAGGGGCTAC CCCCATAGAT
TTTGCTTACC GTATCCATAC CGAACTGGGC AACCGCTGTA TAGGTGCCAA AGCAAACGGG
CGGCTGGTAC CCCTGGATTA CCAGCTGAAA AACGGTGAGG TAGTGGAAAT AGTCACCACC
AAAAAGGACC GCGGCCCCAG CCGTGACTGG CTGAATGCCA ATATGGGTTA TATAAAAACC
CATCACGCCC GCGAAAAGAT ACTGGCCTGG TTCAAAAAAC AGGAACGGAC AGAAAACCTG
GAACGCGGCC GGGAGCTGCT GGAAAAAGAG CTTAAGCATA TCGGCATAAA AACAGTTGAC
CGTGAGGCTT TGGCCAAAGC CTTTAAATAC GAAAATGCAG ATGAATTTCT GGCAGCCATA
GGCTACGGGG CGGTTTCAGT CCATCAGGTA TCCATGAAAC TCCTCAGCCA GCAGGAACAG
CCCAGGGTTA TCACCCCGAC GGTTCAGACC GCCAAGCCCT CCTCCCAGAG CAGTGTTTCG
GTGATGGGCA CCGGTTCTCT TTTAACCAAT ATTGCCAAAT GCTGCAACCC GGTACCCGGT
GACGATATAA TAGGTTATGT CACCCGTAAC CGGGGTGTTA CAGTACACCG TCAGGACTGC
CACAATATTC TCCACGAGGA AGAGAAGGAG AGACTGGTGA GCGTAGACTG GGGTATACCC
AAAGAAGAAC TTTACCCGGC CTCTATCCGC ATGCAGGCCT GGGACAGGGT GGGTCTGGTA
CGGGATATTT CCACCATGGT AGCCGAAGAA AAAATAAGTA TCCTCTCCAT GACCGTAACT
GAAAATGACG ATAAAACTAC CACCCTTGCC ATGACCGCCC AGATAAAAAG CCTTTCCCAG
CTGACCAGGC TGATGGCCAA ACTGGAGGGT ATACGCGGCA TCATAAGTAT CAGCCGGGTG
GGTGCGGACG GCTCAAGGTC CGGCTGA
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| Protein sequence | MEFADLKEKA SKYLPPEKLV FLEEAYNYAA AAHTGQMRKS GEPFIEHPLN VAITLADLQL
DSATLAAALL HDVPEDAHIS LEQIEKKFGA DVAKLVDGVT KLSKLALGPG IEDARRPGGN
ASLRQAENLR KMLVAMSEDL RVVFIKLADR FHNMRTLQAL SAEKRRSIAK ETMEIYAPLA
HRLGIWELKW QLEDLAFRYL DPRHYRQVAN LVDSKLAQRK NYIEHVSAIL QSEFEKNGLK
VELSGRPKHL YSIYQKMEKY ASQGKQFEDI YDVLALRVLV NDIPDCYHAI GIVHSLWHPI
PGAFDDYIAN PKPNGYQSLH TAVMSLGTTP LEVQVRTYQM HHIAEYGVAA HWRYKTAGKE
DVNFEDRIGW LRQLIEWHRD MRGAEEFLES VKTDIFNDQV FVFTPKGEIK DLAKGATPID
FAYRIHTELG NRCIGAKANG RLVPLDYQLK NGEVVEIVTT KKDRGPSRDW LNANMGYIKT
HHAREKILAW FKKQERTENL ERGRELLEKE LKHIGIKTVD REALAKAFKY ENADEFLAAI
GYGAVSVHQV SMKLLSQQEQ PRVITPTVQT AKPSSQSSVS VMGTGSLLTN IAKCCNPVPG
DDIIGYVTRN RGVTVHRQDC HNILHEEEKE RLVSVDWGIP KEELYPASIR MQAWDRVGLV
RDISTMVAEE KISILSMTVT ENDDKTTTLA MTAQIKSLSQ LTRLMAKLEG IRGIISISRV
GADGSRSG
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