Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | DET0004 |
Symbol | gyrB |
ID | 3229139 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dehalococcoides ethenogenes 195 |
Kingdom | Bacteria |
Replicon accession | NC_002936 |
Strand | - |
Start bp | 3881 |
End bp | 5809 |
Gene Length | 1929 bp |
Protein Length | 642 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 637119574 |
Product | DNA gyrase, B subunit |
Protein accession | YP_180759 |
Protein GI | 57233676 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0187] Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit |
TIGRFAM ID | [TIGR01059] DNA gyrase, B subunit [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTAGATG AAAATAAAGC CAAACCGGGT GCAAATGCCG AAAACTATAA CGCCAGTGAT ATCCAGGTAC TGGAAGGTCT GGCCGCTGTC CGCAAAAGAC CGGGCATGTA TATCGGCTCT ACTGACCAGC GCGGTTTGCA CCACCTGGTT TATGAAATTG TTTATAACAG CGTAGATGAA GCTATGGCCG GGGTATGTGA CCGCATAAAG GTCATTATTT ATAAAGACGG CAGCGTCAGC GTTGAAGACA ACGGCCGCGG TATCCCGATA GATATTCACC CTGTGACCAA GATTTCCGCC CTGGAAACAG TTATGACCGT CCTGCATGCC GGTGCCAAAT TCGGCGGCAA GACCTATCAG GTATCCGGCG GTCTGCACGG GGTGGGCGCT TCAGTAGTAA ACGCTCTGGC CGAATGGACT ACGGTCAAGG TCAGGCGTAA CGGCAAAATC TACCAGCAAA GCTACCAGCG CGGCAAGCCC AGCACCCCGC TGGAAGAAGT GGGGGTATCA GACGGTTCCG GCACCACCAC TATATTCAAG GCGGACTCGC AGATATTTTC CACTACGGAA TATGATTTTG AAACCCTGAC TGACCGCCTG CGGGAAATAG CCTACCTCAA CAAAGGGCTT GAGGTTTATA TTTATGACGA ACAATCTGAC CAGGAGCGGA CGTATTATTT TGAGGGCGGC ATCACCGGCT TTGTCCGCCA TTTAAACCGC AACCGCGAGG TACGCCACCG CCAGCCCATT TATATAACCA AAAAATCAGA CAGCACTATA CTGGAAGTAG CTATCCAGTA CAATGACGGC TACTCGGATT CCACCCTGAC CTTTGCCAAC TGTGTAAACA CCATTGACGG CGGCACTCAC CTTACCGGTT TCCGTTCCGC CCTGACCCGG GCTTTCAATG ACTATGCCCA CAAGTCAAAA TTCCTTAAAG ACACAGACCC CAACCTGATG GGTGATGACG TGCGCGAAGG CATAGTAGCC ATTGTCAGCG TCAAACTGCC CGAACCCCAG TTTGAGGGAC AGACCAAAGG CAAGCTGGGA AATATTGAAA TAAAGAGTTT TGTGGAAAGT GCCGTTACCG AACAGCTTTC CCTGTATCTG GAAGAACACC CGGATGATAC CAAACGTATT TTGGAAAAAT GTATCACCGC CGCCAAGGCC CGTGAAGCCG CCCGCAAGGC CCGTGACCTG ATTATCCGCA AGAGCGCTCT GGATACAGGC ACCCTGCCGG GCAAGCTGGC TGACTGTTCG GAACGGGATG CTTCGCTGTG CGAACTCTTT CTGGTAGAGG GTGATTCGGC AGGCGGTTCA GCCAAACAGG GGCGTAACCG CCGCTTTCAG GCCATACTCC CGCTGCGGGG TAAAATTTTA AACGTAGAAA AGGCTTCACC GGACAAGATG CTGGCCCACG AGGAAATCAG GGCTATCATT ACCGCTCTGG CAGCCGGCAT AGATAATGAC TTTGACCCCG CCAAACTGCG CTACAACCGT CTGGTACTCA TGACAGATGC TGACGTGGAC GGCTCACATA TACGGACACT CCTTTTGACC TTTTTCTTCC GCCATATGCC CCGGCTTATT ACCGAAAGCC ACTTGTTTAT TGCCCAGCCG CCTCTTTATA AGATAAAAAT AGGCAGCAAC GAACACTGGG TATACAACGA TGCCGAAAAA GAGACCCTGC TTTCCCAAAC CAAGAGCAAC AAAGTGGATA TCCAGCGCTA TAAAGGTCTG GGTGAAATGA GTGCCGAGCA ACTCTGGAAG ACAACCATGG ACCCGGCCAG CCGCACATTA CTTGAAGTAA AAGTGGAAGA TGCCGCCAAG GCAGACCAGA TTTTTAACCT GCTGATGGGC GGTGAAGTGG CTCCCCGCAA GGCCTTTATC CAGTCCCATT CCAAAACAGT TAAGAATCTG GATATCTAA
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Protein sequence | MLDENKAKPG ANAENYNASD IQVLEGLAAV RKRPGMYIGS TDQRGLHHLV YEIVYNSVDE AMAGVCDRIK VIIYKDGSVS VEDNGRGIPI DIHPVTKISA LETVMTVLHA GAKFGGKTYQ VSGGLHGVGA SVVNALAEWT TVKVRRNGKI YQQSYQRGKP STPLEEVGVS DGSGTTTIFK ADSQIFSTTE YDFETLTDRL REIAYLNKGL EVYIYDEQSD QERTYYFEGG ITGFVRHLNR NREVRHRQPI YITKKSDSTI LEVAIQYNDG YSDSTLTFAN CVNTIDGGTH LTGFRSALTR AFNDYAHKSK FLKDTDPNLM GDDVREGIVA IVSVKLPEPQ FEGQTKGKLG NIEIKSFVES AVTEQLSLYL EEHPDDTKRI LEKCITAAKA REAARKARDL IIRKSALDTG TLPGKLADCS ERDASLCELF LVEGDSAGGS AKQGRNRRFQ AILPLRGKIL NVEKASPDKM LAHEEIRAII TALAAGIDND FDPAKLRYNR LVLMTDADVD GSHIRTLLLT FFFRHMPRLI TESHLFIAQP PLYKIKIGSN EHWVYNDAEK ETLLSQTKSN KVDIQRYKGL GEMSAEQLWK TTMDPASRTL LEVKVEDAAK ADQIFNLLMG GEVAPRKAFI QSHSKTVKNL DI
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