Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cyan8802_4481 |
Symbol | aroE |
ID | 8393833 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cyanothece sp. PCC 8802 |
Kingdom | Bacteria |
Replicon accession | NC_013161 |
Strand | + |
Start bp | 4636061 |
End bp | 4636927 |
Gene Length | 867 bp |
Protein Length | 288 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 644982387 |
Product | shikimate 5-dehydrogenase |
Protein accession | YP_003140098 |
Protein GI | 257062210 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0169] Shikimate 5-dehydrogenase |
TIGRFAM ID | [TIGR00507] shikimate 5-dehydrogenase |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.148819 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTAACAA TTACTGGAAA AACTAAATTA TTAGGAATTA TTGGCTATCC TGTAGAACAT TCCCTATCCC CGGTGATGCA CAATGCAGCG ATTAGCCATT TAGGGCTAGA TTATCTTTAT GTCCCCTTTC CGGTGAACCC CGACAATTTA GAGACAGCGA TCGCCGGATT AGCGACTCTC GGTGTCCTGG GATTTAATGT GACCATTCCC CATAAACAAG CCATTATTCC CTACCTTTCA GAAGTCACTG CAACCGCTAC TATGGTAGGG GCAGTCAATA CCATTTGGAA AGGCGAAAAC GGCTGGAAAG GGACTAATAC GGATATAGAC GGCTTTTTAT CTCCCCTGAA ACGCTTACAA CGAGACTGGA GGAAGATAAC CCCTATCATC CTAGGCCATG GCGGCGCAGC AAGGGCAGTT GTGGTAGCAT TGGCTCAACT AGGATGCCCG ACAATTGGCG TTGTAGGACG GGATCAAGAC AAGTTAGGGC AATTTCAACA AAGTTGGCAA AACACCGACC TTACAGCCCA TTTAACCCTC CATTCCTGGG ACGAATTACC AAGACTCATA GAGACGACAG ACTTATTAAT CAATACTACT CCCATCGGGA TGTCTCCGAA TATTGATGCT TCTCCGATTG ATGCAACCCT GTTCACTAAA ATGAACCAAA AGGCGATTGT CTACGATCTC ATTTATAACC CCAATCCTAC CCAATTACTC CAAGATGCAC AACAACAAGG GATAATGATC ATTGATGGAT TAGAAATGTT GATTGAGCAA GGGGCAGTCG CTTTAGCATT ATGGTTGCAA CAACCTGTTC CTGTTGACAT TATGACCCAA GCTTTACGGC ATTATCTAAA TCTATGA
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Protein sequence | MLTITGKTKL LGIIGYPVEH SLSPVMHNAA ISHLGLDYLY VPFPVNPDNL ETAIAGLATL GVLGFNVTIP HKQAIIPYLS EVTATATMVG AVNTIWKGEN GWKGTNTDID GFLSPLKRLQ RDWRKITPII LGHGGAARAV VVALAQLGCP TIGVVGRDQD KLGQFQQSWQ NTDLTAHLTL HSWDELPRLI ETTDLLINTT PIGMSPNIDA SPIDATLFTK MNQKAIVYDL IYNPNPTQLL QDAQQQGIMI IDGLEMLIEQ GAVALALWLQ QPVPVDIMTQ ALRHYLNL
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