Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cyan8802_4480 |
Symbol | ksgA |
ID | 8393832 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cyanothece sp. PCC 8802 |
Kingdom | Bacteria |
Replicon accession | NC_013161 |
Strand | + |
Start bp | 4635226 |
End bp | 4636044 |
Gene Length | 819 bp |
Protein Length | 272 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 644982386 |
Product | dimethyladenosine transferase |
Protein accession | YP_003140097 |
Protein GI | 257062209 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0030] Dimethyladenosine transferase (rRNA methylation) |
TIGRFAM ID | [TIGR00755] dimethyladenosine transferase |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.225382 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCTCAAC CCCGTAAACG CTTTGCCCAA CATTGGTTAC GCAGCGAAAC AGCCCTAGAT CAAATTATAG AGGCTGCTCA ACTCAACATG AGCGATCTGG TCCTAGAAAT TGGACCCGGA ACGGGAATTT TAACCCGTCG TCTTCTTCCC CTGGTTCAGT CTATCGTAGC AGTAGAACTC GATCGCGATC TTTGTTATCG CTTAGCCAAA AGTTTCGGCA ACTTCAACCA TTTTTTATTA TTAGAAGGGG ATATTCTTAG CCTAGATTTA ACTACCCAAT TAGAACAATT TCCTCAATTT CAGCCCATCA ATAAAGTGGT TGCAAATATC CCCTATAATA TTACCAGTCC TATCTTAGAA AAGCTCTTAG GAAGTATTGC CCATCCCCAA CACCCTAGTT ATGAGTTAAT TGTCTTATTA ATGCAAAAAG AAGTCGCCCA AAGAATTGTT GCTTCTCCTC AGAGTAAAGC CTATGGAGCC CTATCAGTAA GAACCCAATA TTTAGCCCAG TGTGACTATA TTTGTGAGGT TCCTAGCAAA GCCTTTGATC CTCCACCAAA AGTCGATTCT GCTGTCATTC GGTTGACTCC TAGATCGTTA GAAACTCCTG CCATTAACCC GCAAAAATTA GATCAATTGG TTAAATTAGG GTTTGCCAAT CGTCGTAAAA TGTTACACAA TAATTTAAAA TCTATTATTG ATAGGGATCA CCTGACTTTA TTATTAGATC AATTACAGAT TAATCCTCAA GTTCGCGCCG AAGAACTGAG TTTAGAACAA TGGATTATGT TCAGCAATCT TTTAGAGACA GTTTCCTAA
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Protein sequence | MPQPRKRFAQ HWLRSETALD QIIEAAQLNM SDLVLEIGPG TGILTRRLLP LVQSIVAVEL DRDLCYRLAK SFGNFNHFLL LEGDILSLDL TTQLEQFPQF QPINKVVANI PYNITSPILE KLLGSIAHPQ HPSYELIVLL MQKEVAQRIV ASPQSKAYGA LSVRTQYLAQ CDYICEVPSK AFDPPPKVDS AVIRLTPRSL ETPAINPQKL DQLVKLGFAN RRKMLHNNLK SIIDRDHLTL LLDQLQINPQ VRAEELSLEQ WIMFSNLLET VS
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