Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cyan8802_4479 |
Symbol | |
ID | 8393831 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cyanothece sp. PCC 8802 |
Kingdom | Bacteria |
Replicon accession | NC_013161 |
Strand | - |
Start bp | 4633439 |
End bp | 4635097 |
Gene Length | 1659 bp |
Protein Length | 552 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | 644982385 |
Product | sugar (Glycoside-Pentoside-Hexuronide) transporter |
Protein accession | YP_003140096 |
Protein GI | 257062208 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2211] Na+/melibiose symporter and related transporters |
TIGRFAM ID | [TIGR00792] sugar (Glycoside-Pentoside-Hexuronide) transporter |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.176062 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCTGCTC CGAAATCAGA AAAACTTCAT TTTACGACTA AATTAGCCTA TGGTGCGGGA GATTTTGCTC CAGCGATCGC GGCTAATATC TTAGTATTTT ATCTGTTATT TTTCTTTACA AATGTTGCCG GATTATCGGC CGGTTTAGCT GGAAGTATCC TAATGATTGG GAGAATTTCC GATGCGATCA ATGATCCTAT TATCGGGGTA TTAAGCGATC GCACTCGTTC CCGTTGGGGT CGTCGTTTAC CTTGGATTTT AGGGGGAATT TTACCCTTTG CTTTATTATA CAGTTTACAA TGGATTGTTC CTAATTTTAG CAATAATGTT AGCGTTAATC AATGGGCCTT ATTTGGGTAT TATGTTTTAA TTGGTATTCT GTTTAATATT GCCTTCACAA TGGTTAATTT ACCCTACACC GCATTAACCC CAGAATTAAC CCAAGATTAT AACGAACGCA CCAGTCTTAA TAGTTTTCGC TTCGCCTTTT CTATTGGGGG AAGTATTCTT TCTTTAATTT TGTTTATTCT GATTTCTATT GCTTATCCTG ATGATGCTAA AACTCGCTAT TTTATTTTAG GATTAAGTTG TTCTGTGCTA GGTGTTATTG CTTTATTATG GTGTAGTCTT CGGGTTCAGG AACGCGGGTC AAATCCCATC TTAAATTCTG CCCAAAAACA AGCAATAGGA AGAGTCCTCT TAGGATTAGG AATAGCGGGG ATTTTTTATG CTATTTTAAG GATGATTCCT GGGGTATCAA CCTTCGTCGG AGGAGTAGGG AGATTTGATT ATTTGAGCTT TTTCGCTTTA CTCATGAGTT TACTTATCTT TGGGTTTGGC TATACCTTAT TATTCGCTAA TTCAGAAAAT CACTTGACTA ATGAAACAGC AATTCAAAAT AATAATAACT CCAAAGATGC CTCTTCTCTT TCCTTTGCAG AACAGTTAAA AATTGTTTTT AATAATCGTC CTTTTTTGTT TGTTATCGGA ATTTATTTAT GTTCTTGGTT AGCCGTTCAA TTAACAGCTT CTATTTTAGT TTATTTTGTC GTTAGTTACA TGAGATTAGG GGAAGATAAA TCAGGGTTTG TAGCATTAGG AGTTCAAGGA ACCGCTTTGG TGATGTTATT TGTATGGCAA GAAGTGAGTA AAAAATTCGA TAAAAAAATA GTTTATTTCC TAGGGATGGG ATTTTGGATT ATTGCTCAAA TTGGTTTATT TTTATTGCAA CCAGGGCAAA TAGTTTTGAT GTTTGCATTA ACTATTTTAG CCGGGTTTGG TGTATCAGTT GCCTATTTAA TTCCTTGGTC AATGGTTCCT GATATTATTG AATTAGACGA ATTAGAAACG GGGAAAAGAC GAGAAGGAAT TTTCTATGCG TTTATGGTTT TATTGCAAAA ATTTGGGTTA GCGTTTGGTC TATTTTTAGT CGGAATTGCC TTAGAAAGTG CCGGATTTAT TGAACGTATC CCCGGAGAAC CCATTCCAGT GCAACCCGAA AGTGCCTTAT TAGCGATTCG GATTGCGATC GCTCCCCTTC CTGCGGTAAT ATTAATAATT GGGTTAGTCT TAGCTTATTT TTATCCCATT ACCCGCGAAG TTCACGCAGA AATTCGCTTA AAATTACAAG AAAAATATGA GAGAGAAGAG TCTAACTAA
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Protein sequence | MAAPKSEKLH FTTKLAYGAG DFAPAIAANI LVFYLLFFFT NVAGLSAGLA GSILMIGRIS DAINDPIIGV LSDRTRSRWG RRLPWILGGI LPFALLYSLQ WIVPNFSNNV SVNQWALFGY YVLIGILFNI AFTMVNLPYT ALTPELTQDY NERTSLNSFR FAFSIGGSIL SLILFILISI AYPDDAKTRY FILGLSCSVL GVIALLWCSL RVQERGSNPI LNSAQKQAIG RVLLGLGIAG IFYAILRMIP GVSTFVGGVG RFDYLSFFAL LMSLLIFGFG YTLLFANSEN HLTNETAIQN NNNSKDASSL SFAEQLKIVF NNRPFLFVIG IYLCSWLAVQ LTASILVYFV VSYMRLGEDK SGFVALGVQG TALVMLFVWQ EVSKKFDKKI VYFLGMGFWI IAQIGLFLLQ PGQIVLMFAL TILAGFGVSV AYLIPWSMVP DIIELDELET GKRREGIFYA FMVLLQKFGL AFGLFLVGIA LESAGFIERI PGEPIPVQPE SALLAIRIAI APLPAVILII GLVLAYFYPI TREVHAEIRL KLQEKYEREE SN
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