Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cyan8802_4471 |
Symbol | |
ID | 8393823 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cyanothece sp. PCC 8802 |
Kingdom | Bacteria |
Replicon accession | NC_013161 |
Strand | - |
Start bp | 4620592 |
End bp | 4622382 |
Gene Length | 1791 bp |
Protein Length | 596 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 644982378 |
Product | TrkA-C domain protein |
Protein accession | YP_003140089 |
Protein GI | 257062201 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0471] Di- and tricarboxylate transporters |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCCTTT TTTTGACCTT GGGTATTGTG GTATTAGCCT TGATTATCTT GATTACTGAA TGGTTTCCGG CGGATTTTAC GGCCTTAATG GTAGCAGTGA TCTTAATGGT TGTAGGCATC GTCACCCCAG AAGAAGGCCT CTCAGGTGTT AGCAACCCTG CAACGCTGAC TGTCATGGCT ATGTTTATTT TAAGCGCGGG AATCGTTCGT ACTGATGCTA CTCAGCCAAT TCGAGACGTT TTGCTCAAAT GGGGAGGCAA GGAAACACGA CGACAAATTT TAGTCATGGG AACCATTCTT GGTCCGTTGA GTGCTTTTAT GAGTAATACG GCCATTGTGA CGATTTTTTT ACCCATTGTT GAAGATTGGT GTCGCAGAAG CCGTATTTCT GTCTCTAAAC TCCTTTTACC CCTATCGTAT ATTACAATTT TGGGTGGAAC GATCACCGTT TTGGGGACTT CTACTAATAT TTTAGCCAGT GGAATTTGTG TCCAATTAGG GTATAAACCG TTGGGAATTT TTCAGTTAAC CCCTTTAGGA ATAATTGCTT TTATTATCGG TTTATTCTAT CTGTCTTGTC TGGCTCCTTT ATTATTACCT GAACGCAAAA AACCGGATCA AGATTTATTG GCAGAAGATT ACGATCTCAA GGCTTATTTA ACAGAATTAG TAGTAACTCC AACTTCAAGT TTAATTGGTC AAACAATCCG TCAAAGTGAA ATTCAACGTA AGTTTGATTT AGATGTTTTA GAACTCATTC GCAATAATAA TCATTTTCCT CAACCCTTAG CGGATAAAAT TTTAAAATCA CAAGATATTT TGCTAGTTAG AAGCACTCAA ACAGAGTTAT TAAAGCTGCG AGAAGAAAAA GGACTCGATA TTTTGCCCGA TGTTCAGTTT CCGGAAGAAA CGTTAACCCT TGAATTAACC TCCTTAGAAG AGAAAATCGC TGAGGTGATG ATTCTTTCTA ATTCGCGTTT AATTGGGTCA ACCTTGAAAG ATTTACGCTT CCGACAACGC TATAATGCTA CGGTTTTGGC TATTCGACGG GGAGAAGAAT TATTAAGGGA ACGCTTAGGT CAAATTCCCC TGCACTTTGG CGATTTATTG CTGGTTCAAG GTCCGAAAGA TAGTTTTTTG GGATTGCAAA CGACGAGGGA ATTATTAGTC CTAGAAGAGC GAGATCTCGA AAGTTTACGA CCCGAAAAAG CTCCCATTGC GATCGCTATT ATGATAGGTG TGGTTATTAT AACTGCCTGT CACTGGTTGC CTATCTTAGT GAGTGCTTTA TTAGGGGTGG TTTTAATGGT GTTAACAGGG TGTTTGAAAC CTGGGGAAAT CTATGGGACG GTGCGATGGG ATGTCATTTT TTTATTAGCC GGATTGATTC CTTTAGAAAT TGCCATGGAT AAATCCGGAG GAACCCAGTG GTTAGTTGAA AAAATTGTTG CAGTTGGTGG CGGATTATCG GGATATGAAC TGTTATTATT TTTCTATTTA GTGACGGTTT TTTTGACAGA AATTATCTCA AATAATGCTG CTGTTTTATT GATGATCCCC CTCGCAGTTA AGATAGCTCA ATCCTTGAGT TTTAATCCCT ATGGATTTAT TCTTGATGTT ACTTTTGCCG CTTCTAATAG TTTTATGACT CCTCTGGGAT GTCAAACTAA TTTAATTGTT TATGCACCCG GAGGCTATCG CTTTCTTGAT TTCTTCCGAG TGGGTTTACC CTTAACGTTA TTAATGGCTG CGATCGCTCC TTTTTTAATT ATGATGATTT ATGGATTGTA A
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Protein sequence | MTLFLTLGIV VLALIILITE WFPADFTALM VAVILMVVGI VTPEEGLSGV SNPATLTVMA MFILSAGIVR TDATQPIRDV LLKWGGKETR RQILVMGTIL GPLSAFMSNT AIVTIFLPIV EDWCRRSRIS VSKLLLPLSY ITILGGTITV LGTSTNILAS GICVQLGYKP LGIFQLTPLG IIAFIIGLFY LSCLAPLLLP ERKKPDQDLL AEDYDLKAYL TELVVTPTSS LIGQTIRQSE IQRKFDLDVL ELIRNNNHFP QPLADKILKS QDILLVRSTQ TELLKLREEK GLDILPDVQF PEETLTLELT SLEEKIAEVM ILSNSRLIGS TLKDLRFRQR YNATVLAIRR GEELLRERLG QIPLHFGDLL LVQGPKDSFL GLQTTRELLV LEERDLESLR PEKAPIAIAI MIGVVIITAC HWLPILVSAL LGVVLMVLTG CLKPGEIYGT VRWDVIFLLA GLIPLEIAMD KSGGTQWLVE KIVAVGGGLS GYELLLFFYL VTVFLTEIIS NNAAVLLMIP LAVKIAQSLS FNPYGFILDV TFAASNSFMT PLGCQTNLIV YAPGGYRFLD FFRVGLPLTL LMAAIAPFLI MMIYGL
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