Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cyan8802_4392 |
Symbol | |
ID | 8393744 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cyanothece sp. PCC 8802 |
Kingdom | Bacteria |
Replicon accession | NC_013161 |
Strand | + |
Start bp | 4537339 |
End bp | 4538115 |
Gene Length | 777 bp |
Protein Length | 258 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 644982301 |
Product | RNA polymerase sigma factor SigF |
Protein accession | YP_003140012 |
Protein GI | 257062124 |
COG category | [K] Transcription |
COG ID | [COG1191] DNA-directed RNA polymerase specialized sigma subunit |
TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.135805 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 3 |
Fosmid unclonability p-value | 0.00000384566 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGTCTACCC CCATCAAAGA AAATTTAAAA CTCGATACTC TTCGTTTATT TCTGGATTAT CAAAAAACGG GAAGCATCCA ACTGCGTAAC CAGATTTTGG AACTCAATTT TGGGTTAGTT CGCAAAGAAG CATACCATTG GGTTAACCAT TGTTCTGAAA GCTATGAAGA TTTGTTACAA GTTGGCTCAT TAGGACTCAT TCGAGCCATT GAGCGTTTTA ATAGCGAAAA AGGTCATGCG TTTAGTTCCT TCGCGCTGCC CTACATTCGG GGAGAAATTC AACACTACCT GCGGGACAAA GGGTATACCG TTCGTATTCC CCGACGCTGG TTAGAGATAG GACAACAAGT CAAAAGCATT AAACAAGACT TTCGCGAACG GTTCAACCGT CAACCAACGG ATTCAGAAAT TGCTCAAATT TTGGAAATTC CCCTGAAAGA GTGGCAAGAA ATTCAACTCG CTTTTCAAAA CCGTGAACCC CTCAGTCTGG ATCTTAAAGT CGGTAATGAC AGTGATGGAC AAACCAGCTT AGCGGATTTA GTTCCTGATC CCAACTATCG GAGTTTTCAA TTAAGTCAAG AAGATCAAAT TCGTTTACAA CAAGGATTAG CACAATTAGA AGAACGCACA CGACGAATTT TAGAATTTGT GTTTCTTCAG GATCTCACTC AACGGGAAAC GGCCGAACAA TTGGGGATTA GTGTCGTGAC TGTCTCTCGA CGGGTGAAAA AAGGACTAGA AATCCTCAAA CAAACCATGA CGGCAGAGAT CTGGTAA
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Protein sequence | MSTPIKENLK LDTLRLFLDY QKTGSIQLRN QILELNFGLV RKEAYHWVNH CSESYEDLLQ VGSLGLIRAI ERFNSEKGHA FSSFALPYIR GEIQHYLRDK GYTVRIPRRW LEIGQQVKSI KQDFRERFNR QPTDSEIAQI LEIPLKEWQE IQLAFQNREP LSLDLKVGND SDGQTSLADL VPDPNYRSFQ LSQEDQIRLQ QGLAQLEERT RRILEFVFLQ DLTQRETAEQ LGISVVTVSR RVKKGLEILK QTMTAEIW
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