| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cyan8802_4112 |
|---|
| Symbol | |
|---|
| ID | 8393463 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cyanothece sp. PCC 8802 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013161 |
|---|
| Strand | - |
|---|
| Start bp | 4239153 |
|---|
| End bp | 4239782 |
|---|
| Gene Length | 630 bp |
|---|
| Protein Length | 209 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 34% |
|---|
| IMG OID | 644982029 |
|---|
| Product | SNARE associated Golgi protein |
|---|
| Protein accession | YP_003139741 |
|---|
| Protein GI | 257061853 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG0398] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 0.00687322 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACTCTAG TAAATGAAAG CTTACAAAAT CTTTTACAAT GGATAGATAG CCTAGGAATC
TTAGGTTATC TTGTGTTTAT TTTGGTTTAT GTAATCGCAA CCGTTTTCTT GATTTCTGGG
CTGATTTTAA CCCTAGGTGC AGGAATTATT TTTAATGTCG TTAAAGGTTC AATTTTAGTT
TCTATTGCTT CAACATTAGG AGCAACTTCT GCTTTTTTAA TTGGACGATA TTTTACGAGA
GATTGGGTTA AAAAACAAAT TGAAAAACGC CCCCAATTTC AAGCAATTGA TGAAGCAGTT
GCTAAAGAAG GTTGGAAAAT TGTCGGATTA ACTCGTTTAT CTCCCCTATT TCCCTTTATC
TTTTTAAATT ATGCTTTTAG TGTTACCAAA GTATCCCTAA GAGACTATAT TATCGCTTCG
TGGATAGGCA TGATTCCAGG GACAATTATG TATGTTTATA TTGGCTCCTT AATTGGCGAT
ATAGCTAGTC TTGGCATCCA ACAAAGAGAA AAAACATCCC TAGAATGGGG CTTATATATT
GTTGGATTAA TTGCAACAAT TGTCGTCACA ATTTATGTGA CTAAAATTGC CAAAAAAGCT
TTGAATAGTA AAGTTAATCA GCCATCCTAG
|
|---|
| Protein sequence | MTLVNESLQN LLQWIDSLGI LGYLVFILVY VIATVFLISG LILTLGAGII FNVVKGSILV
SIASTLGATS AFLIGRYFTR DWVKKQIEKR PQFQAIDEAV AKEGWKIVGL TRLSPLFPFI
FLNYAFSVTK VSLRDYIIAS WIGMIPGTIM YVYIGSLIGD IASLGIQQRE KTSLEWGLYI
VGLIATIVVT IYVTKIAKKA LNSKVNQPS
|
|---|
| |