Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cyan8802_4062 |
Symbol | |
ID | 8393413 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cyanothece sp. PCC 8802 |
Kingdom | Bacteria |
Replicon accession | NC_013161 |
Strand | + |
Start bp | 4184307 |
End bp | 4186382 |
Gene Length | 2076 bp |
Protein Length | 691 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 644981981 |
Product | NAD(P)H-quinone oxidoreductase subunit F |
Protein accession | YP_003139694 |
Protein GI | 257061806 |
COG category | [C] Energy production and conversion [P] Inorganic ion transport and metabolism |
COG ID | [COG1009] NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit |
TIGRFAM ID | [TIGR01974] proton-translocating NADH-quinone oxidoreductase, chain L |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.697145 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAGTGAAA CCCTTTATGA ATACGCCTGG CTAATACCCG TCCTACCCTT GGTCGGGGCG ATGTTAGTCG GGTTAGGACT AATTTCCTTT AATCAAGGAA CCAACCGCCT CCGACAAGTG AATGCCGTTT TTATCATCAC CCTCTTGGGG GCTTCCATGG TGATGTCCTT TGCCCTGTTA TGGAGTCAAA TTAACGGTCA TGGGGACTAT ACCCGCATGA TTGAATGGGC AGCGGCCGGC AATTTTCACC TAAATATGGG TTACACCATT GACCATCTCA GTGCCCTGAT GAGTGTTATC GTCACCACCG TTGCGTTGCT GGTGATGGTC TACACCGATG GTTATATGGC CCATGACCCA GGATATGTAC GATTTTATGC GTATTTAAGC ATATTTAGTG CTTCGATGCT AGGGTTAGTC ATCAGTCCTA ACCTAGTGCA AGTTTATATC TTCTGGGAAC TGGTAGGGAT GTGTTCCTAC CTGTTAATTG GATTTTGGTT TGACCGCAAA GCTGCCGCCG ATGCTTGTCA AAAAGCCTTT GTCACTAACC GGGTAGGGGA CTTTGGCCTC CTGTTGGGAA TGTTAGGACT CTATTGGGCT ACTGGAAGCT TCGACTTCCA CATTATGGGA GAACGCCTCG AAGAATTAGT CTCTGTAGGA ACCATTGCCC CTGCTTTAGC AGCCATATTT GCCGTTTTGG TCTTTTTAGG TCCTGTGGCA AAATCTGCCC AATTCCCTCT CCATGTGTGG CTACCCGACG CAATGGAAGG TCCTACCCCC ATTTCTGCCC TTATCCACGC AGCAACGATG GTCGCGGCCG GTGTTTTCTT GGTGGCGCGG ATGTACCCCG TCTTTGAAGA AATTCCCCTA GCCATGACCA CCATTGCCTG GACGGGGGCG ATGACCTCCT TTTTAGGCGC AACCATCGCC TTAACCCAAA ATGACATCAA GAAAGGGTTA GCCTATTCCA CCATCTCCCA ATTAGGCTAC ATGGTCATGG CCATGGGTAT CGGTGCGTAT ACGGCAGGAC TATTCCACCT GATGACCCAT GCTTACTTTA AAGCCATGTT ATTCCTCTGT TCTGGGTCTG TTATTCATGG TATGGAAGGC GTTGTCGGTC ATGACCCCGT ATTAGCCCAA GATATGCGCT TAATGGGGGG TTTACGCAAG TATATGCCCC TAACGTCCTT AGCGTTTTTG ATTGGAACCT TAGCCATTTG TGGGATACCT CCCTTTGCGG GTTTCTGGTC GAAAGATGAA ATTCTCGGCC TTGCCTTTAC CGCTAACCCG GCTTTATGGG TGGTTGGTTG GTTAACGGCA GGTCTAACGG CATTTTATAT GTTCCGTATG TATTTCATGA CCTTTGAAGG CGAATTTCGG GGCAATGATC AAACCATTAA AGACCAATTG TTAGCCTCCA TGGGAGTTTC TTCTCCTCTG CCTCAATTCG GTCCTGGGGC GATGGATGTT AAGGAATTAG ACCATCCTAC CCACGATCAT GATCATGATC ATGGTCATGG TCATGGGCAC AGCCATTCAC CCCATGAGTC GCCTTTAACG ATGACCTTAC CTTTGTTAAT TTTGGCGGTT CCTTCGACCT TAATTGGGTT ATTAGGGAAG CCTTGGGATA ATACTTTTGA AGGGTTTATT TTTGCCCCTG GAGAAGTTGT TGAAGCGGTT GCCCATTTTG ATTGGACTGA ATTTTTGATC ATGGCTGGCA GTTCAGTGGG TATTGCCTTA ATTGGGATTA CTGTTGCTTC TTTGATGTAT TTACAACACA AAATCGATCC CGCAGCCATT GCTAAAAAAT ACCCGGCATT GTATCAATTC TCCCTCAATA AATGGTACTT CGACGATATT TATCATCGCG TTTTTGTGAT GGGATGTCGT CGTCTTGCCC GTCAAATTAT GGAAGTAGAT TATCGTGTCA TTGATGGTGC GGTTAATCTA ACGGGTTTAG CTACCATTGT TAGTGGAGAA GGCTTGAAAT ACTTAGAAAA TGGTCGCGCC CAATTCTATG CTTTAATTGT CTTTGGGGCT GTGTTGGGAT TCGTGATTGT TTTTAGTGTG GTTTAA
|
Protein sequence | MSETLYEYAW LIPVLPLVGA MLVGLGLISF NQGTNRLRQV NAVFIITLLG ASMVMSFALL WSQINGHGDY TRMIEWAAAG NFHLNMGYTI DHLSALMSVI VTTVALLVMV YTDGYMAHDP GYVRFYAYLS IFSASMLGLV ISPNLVQVYI FWELVGMCSY LLIGFWFDRK AAADACQKAF VTNRVGDFGL LLGMLGLYWA TGSFDFHIMG ERLEELVSVG TIAPALAAIF AVLVFLGPVA KSAQFPLHVW LPDAMEGPTP ISALIHAATM VAAGVFLVAR MYPVFEEIPL AMTTIAWTGA MTSFLGATIA LTQNDIKKGL AYSTISQLGY MVMAMGIGAY TAGLFHLMTH AYFKAMLFLC SGSVIHGMEG VVGHDPVLAQ DMRLMGGLRK YMPLTSLAFL IGTLAICGIP PFAGFWSKDE ILGLAFTANP ALWVVGWLTA GLTAFYMFRM YFMTFEGEFR GNDQTIKDQL LASMGVSSPL PQFGPGAMDV KELDHPTHDH DHDHGHGHGH SHSPHESPLT MTLPLLILAV PSTLIGLLGK PWDNTFEGFI FAPGEVVEAV AHFDWTEFLI MAGSSVGIAL IGITVASLMY LQHKIDPAAI AKKYPALYQF SLNKWYFDDI YHRVFVMGCR RLARQIMEVD YRVIDGAVNL TGLATIVSGE GLKYLENGRA QFYALIVFGA VLGFVIVFSV V
|
| |