Gene Cyan8802_4014 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCyan8802_4014 
Symbol 
ID8393364 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCyanothece sp. PCC 8802 
KingdomBacteria 
Replicon accessionNC_013161 
Strand
Start bp4129517 
End bp4130944 
Gene Length1428 bp 
Protein Length475 aa 
Translation table11 
GC content46% 
IMG OID644981934 
Productisocitrate dehydrogenase 
Protein accessionYP_003139648 
Protein GI257061760 
COG category[C] Energy production and conversion 
COG ID[COG0538] Isocitrate dehydrogenases 
TIGRFAM ID[TIGR00183] isocitrate dehydrogenase, NADP-dependent, prokaryotic type 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTACGAAA AACTAACCCC TCCCTCCACT GGTTCTAAAA TTACCTTTAA AGACGGTAAA 
CCTATTGTTC CCGATGATCC CATCATTCCC TTCATCCGTG GCGATGGAAC AGGGGTAGAT
ATCTGGCCTG CTACTGAAAA AGTCATCGAT GCTGCTGTTG CTGCTGCTTA CGGAGGTCAA
CGCAAAATTA ACTGGTTTAA GGTCTATGCA GGGGATGAAG CTTGCGATCT CTACGGAACT
TATCAATACT TACCCGATGA TACCCTAAAA GCGATCGAAG AATATGGTAT TGCCATCAAA
GGACCCTTAA CGACCCCTAT CGGTGGTGGT ATTCGGTCAT TAAACGTCGC GTTACGGCAA
ATTTTCACCC TCTATGCTTG CGTTCGTCCC TGTCGTTACT ATGCGGGAAC CCCTTCCCCC
CACAAGTCCC CCGAAAAACT CGATGTCATC GTCTATCGGG AGAATACCGA GGATATCTAT
CTGGGAATTG AATGGCGAGA AGGCAGCGAA ATTGGGCAAA AATTGATTAA ATACCTCAAT
GATGAGTTAA TTCCCGCCAC TCCTGAACAC GGCAAAAAAC GCATCCCTCT AGACGCAGGA
ATTGGGGTTA AACCCATCAG TAAAACGGGT TCCCAACGGT TAGTTCGTCG CGCAATGGAA
CACGCTTTAC GTCTCCCTAA AGCGAAGCAA ATGGTGACGT TAGTCCACAA AGGGAATATC
ATGAAATATA CCGAGGGAGC GTTTCGAGAT TGGGGGTATG AACTCGCTAC CACAGAATTT
CGGGATGTCT GCGTTACGGA ACGAGAATCT TGGATTTTGA GTAATAAAGA GGGTAATCCT
AATATTAGTA TCGAAGATAA TGCCCGTAAA GTCGAGCCTG GTTACGATGC GCTGACCCCT
GAGAAGAAAA AAGAAGCCTG TGACGAAGTT AAATCGGTTT TAGATGCTAT TTGGGATAGT
CACGGGGATG GTAAATGGAA GGATAAGATC ATGGTGAACG ATCGCATTGC TGATAGTATC
TTCCAACAAA TTCAAACCCG TCCTGATGAA TATTCTATCC TTGCTACCAT GAACCTGAAC
GGGGACTATC TCTCTGATGC TGCTGCTGCG GTGGTTGGTG GTTTAGGAAT GGGACCTGGT
GCCAATATTG GGGATACCTG TGCTATTTTT GAGGCTACCC ACGGAACTGC GCCAAAACAC
GCGGGTTTAG ACCGTATTAA CCCGGGTTCG GTGATTTTAT CGGGGGTAAT GATGTTAGAG
TATATGGGAT GGCAAGAAGC AGCCGATTTG ATTAAAAAAG GCTTGGGAAA TGCGATCGCT
AATCGGGAAG TAACGTACGA TTTAGCGCGG TTGATGGAAC CTCCTGTCGA TCCTCCCTTG
AAATGTTCCG AGTTTGCACA AGCCATTATC AATCATTTTG CGGATTAG
 
Protein sequence
MYEKLTPPST GSKITFKDGK PIVPDDPIIP FIRGDGTGVD IWPATEKVID AAVAAAYGGQ 
RKINWFKVYA GDEACDLYGT YQYLPDDTLK AIEEYGIAIK GPLTTPIGGG IRSLNVALRQ
IFTLYACVRP CRYYAGTPSP HKSPEKLDVI VYRENTEDIY LGIEWREGSE IGQKLIKYLN
DELIPATPEH GKKRIPLDAG IGVKPISKTG SQRLVRRAME HALRLPKAKQ MVTLVHKGNI
MKYTEGAFRD WGYELATTEF RDVCVTERES WILSNKEGNP NISIEDNARK VEPGYDALTP
EKKKEACDEV KSVLDAIWDS HGDGKWKDKI MVNDRIADSI FQQIQTRPDE YSILATMNLN
GDYLSDAAAA VVGGLGMGPG ANIGDTCAIF EATHGTAPKH AGLDRINPGS VILSGVMMLE
YMGWQEAADL IKKGLGNAIA NREVTYDLAR LMEPPVDPPL KCSEFAQAII NHFAD