Gene Cyan8802_3948 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCyan8802_3948 
Symbol 
ID8393298 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCyanothece sp. PCC 8802 
KingdomBacteria 
Replicon accessionNC_013161 
Strand
Start bp4069735 
End bp4070322 
Gene Length588 bp 
Protein Length195 aa 
Translation table11 
GC content36% 
IMG OID644981873 
Productlipase class 2 
Protein accessionYP_003139587 
Protein GI257061699 
COG category[R] General function prediction only 
COG ID[COG1075] Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.759031 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00661405 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAAAAACC GTAATCCTGT TGTACTGGTT CATGGAATTT ACGATACCGA AGTAAAATTT 
AACACCATGA AACGCTATCT AACTAAATTA GGTTGGTCAG TCCATTGTCT TAATCTTAAA
CCCAATAATG GCGATAGTCA TCTTGAATAT TTAGCCGAAC AAGTTGCTAA TTATATTAAT
AATATGTTTG CTTCTGAACA ACCTATTGAT TTAATTGGGT TTAGTATGGG AGGACTGGTA
ACACGCTATT ATTTACAACG ACTTGGGGGG ATTAATAAAG TTCATCGTTA TATTAGCATT
TCTGCGCCCA ATAATGGCAC ATTAACGGCT TATACCTTAC CCCGTCCTGG GGTTAAACAA
ATGCGTCCTA ATAGCAAATT TTTACAAGAT TTGAATCAAG ATATTAAAGA CAGTTTAAGT
CAGATTAATG TTACCGTTAT CTGGACTCCC TATGACTTAC TAATTGTTCC CCCAAACAGT
TCGCAAATTA ATATCGGCAA AGAAATTAAA CTCCCTGTCT TAGTGCATGA ATGGATGGTT
AAAGATAGCA GAACCTTAAA AGCCATCTCT CAAGCATTGA GTGAATAG
 
Protein sequence
MKNRNPVVLV HGIYDTEVKF NTMKRYLTKL GWSVHCLNLK PNNGDSHLEY LAEQVANYIN 
NMFASEQPID LIGFSMGGLV TRYYLQRLGG INKVHRYISI SAPNNGTLTA YTLPRPGVKQ
MRPNSKFLQD LNQDIKDSLS QINVTVIWTP YDLLIVPPNS SQINIGKEIK LPVLVHEWMV
KDSRTLKAIS QALSE