Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cyan8802_3837 |
Symbol | |
ID | 8393187 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cyanothece sp. PCC 8802 |
Kingdom | Bacteria |
Replicon accession | NC_013161 |
Strand | - |
Start bp | 3950054 |
End bp | 3950821 |
Gene Length | 768 bp |
Protein Length | 255 aa |
Translation table | 11 |
GC content | 32% |
IMG OID | 644981762 |
Product | transcriptional regulator, GntR family |
Protein accession | YP_003139476 |
Protein GI | 257061588 |
COG category | [K] Transcription |
COG ID | [COG2188] Transcriptional regulators |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.10255 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.78635 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGATCAAA CGAATAAAAC TCGTTATGCA GAAATTGCCG ATGATGTAAC TGAAAAAATT TATCAAGGAA TCTATAGACC AGGAGATTCC CTTCCGCGAG AAAATGAATT AGCTGATGAA TATGGAGTCC ATCGTCTCAC GGTTCGCCAT GCGTTCCAAA TTTTACAAGA GAAAGGTGTT GTCTATCGTG ATCCATCGGG AAAGTGTATT GTGAAGAAAA ATAAACTATG TTATTCTTTA AACGGTAAAA CAGGTTTTAG TGATAACCTG AGTAACATTG GTTATATTCC TTATCGAAAA TTGTTAAGCA ATGAAGTAGT CTTCCCTTCA CCTATTATTG CTAATTTGCT GAAGATACCT GAACAAAAAA AGATTGTTGA GATTGTTTTT TTACGGGGGG GAATTCCTAA ACAAAAGGAT CACAAAAATC AAGATATCTA TCCGATTTGT TTAAGCAAAA GTTATATTAT TGCTGAAAAA TTTCCAGGGT TATTTAAGCT GATTGACTTA GGTAATTCTT TTTATGATTT ACTAAAAAGT CACTATAAAA TTGAGCCTCA ATGTCAAAGA AATTTAATTG AAACCGATCT CGCTTCCAAA GAAGATATCA AGTTATTAAA AATTGATCCG GGTCATCCTA TACTAATTAC TAAAAACTTT GTTTATGACC AAAATAATCA GTTATTTGAA TATACAGAGA GTCGTTTTAG AGGAGATTTT GTTAGCTTTG ACATTTTATT TAATCAAGAG TTAATCGTTA ACAGCTAA
|
Protein sequence | MDQTNKTRYA EIADDVTEKI YQGIYRPGDS LPRENELADE YGVHRLTVRH AFQILQEKGV VYRDPSGKCI VKKNKLCYSL NGKTGFSDNL SNIGYIPYRK LLSNEVVFPS PIIANLLKIP EQKKIVEIVF LRGGIPKQKD HKNQDIYPIC LSKSYIIAEK FPGLFKLIDL GNSFYDLLKS HYKIEPQCQR NLIETDLASK EDIKLLKIDP GHPILITKNF VYDQNNQLFE YTESRFRGDF VSFDILFNQE LIVNS
|
| |