Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cyan8802_3725 |
Symbol | |
ID | 8393073 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cyanothece sp. PCC 8802 |
Kingdom | Bacteria |
Replicon accession | NC_013161 |
Strand | + |
Start bp | 3809195 |
End bp | 3810745 |
Gene Length | 1551 bp |
Protein Length | 516 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 644981656 |
Product | efflux transporter, RND family, MFP subunit |
Protein accession | YP_003139372 |
Protein GI | 257061484 |
COG category | [V] Defense mechanisms |
COG ID | [COG1566] Multidrug resistance efflux pump |
TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.183704 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAATCAC CAGAAATTTC CTCACAGCCT TCAACAACGA CCGATCTTAA ATTTGAAGAG CAAAAAGACG AAAAAACCAA CAATAGTCAG CAAAAAAATT CAAAATTATT AAAATGGTTA ATTCCCCTTG CTATTTTAGG AGGAGGAATC GCTATAGGAC AAATTTTCAC CCCATCTCCT ACCCCAACAG ACCAAAGTAG CAATCAAACC CCACCCCCTA AACCCGTTGA AACCATCACC TTAACCGTGA GTAACGGAAA AAGAGAGGTT CGGTTACTCG GACAGGTGGA AGCAGGAGGA AAAGCTACCC TAAGCTCGCA AATTGACGGA ACAGTCCAAA AAATTGTCGT GAAAGAAGGG GATGTCATTA CTCCGGGCAT GACCGTCGCT ATTTTAGACG ATGCTGATGC CAACATTGCC CTCGCCCAAG CCAAAGCAAG ATTAGTACAA GAAAAAAGTA ACTTAGCCCG GTTGCAAGTG GGGACACGGC CTGAGATTAT TCGACAACGA GAAGCCGAAT TAACCGCAGC CCAAGCCAGA GAACGAGAAG CCTTAGAAAC CCTAGAAAGT TTGATCGCCT TACAGCCTGA CTTAATTGCC CAACGTCAAG CGGAACTTGA AACCGTCAAA ACTAGAGAAA AAGAAGCCCA AGACAACCGA CAGAGAATAC AACGATTAAG CTTAGAAGGA GCCCTTTCAG AAAGAGCATT AGTTGAGGCA AAATCCAGTG CTGATGCCTT TCGTAGCGAA CGGATACGCG CTCAAGCGGC CTTAAAAGCC CAAGAAACCG AAAGCCGTAA AGCGATCGCC GAAGCCCGAA CCGGTTATGA TAATGCCAAA AGCGATCGCC TACGGATTGC AGCCCTGTTA GCAGAAGCCC AAGCCGGCCC CACCCAAGAA GAAATTCAAG CACAACAGGG GGTAGTCAGT GCCGCGAATG CTGCCGTAGA ACAGGCAAAA TTAGCTCTAG AACGCACGAA AATCAAAGCC TCTGTATCGG GGGTCGTTCA GTCAAGAGAA GCCGATCCAG GGGATTATGT AGAGGTCAAC AATCCGATTG TCACCTTAGT TAGCGATCGC TCCTTAGATA TCTTTTTAGA AATTCCTGAA ACTTTAAGCG GACAAGTCAC CGAAGGGATG AGGGTGAATT TATTCGCCCG TGCCTTACCT AATTGGCAAA AAGCAACAGA AATTACGGCT GTTGTTCCTG TTGCTAATGT CAATTCTCGC CGACAATTAG TGCGAGTTAC CCTTAATAAT CCCCCTAAGA ATTTATTACC GGGTATGGCC ATTCAAGCTG ACTTAATGAT GCCTATTTCA GAGGCTAATA CCTTTACTGT CCCAAGAGAT GCCCTAACCA GACGGGGGGA GCAATGGCTT TTATTTAAGG TCAATGATAA TCAAGCCAAA CAATTAGAAG TAGAAATGAT TGCCGATTTA GGGGAAGAGG TCATGATTAG TCATCCTCAG TTAAAACAAG GTCAATCTGT TGTCATTAAA GGCGGAGATG CACTCAAAGA TAATACTGTC GTAACAATTG TCAAAAGTTA A
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Protein sequence | MKSPEISSQP STTTDLKFEE QKDEKTNNSQ QKNSKLLKWL IPLAILGGGI AIGQIFTPSP TPTDQSSNQT PPPKPVETIT LTVSNGKREV RLLGQVEAGG KATLSSQIDG TVQKIVVKEG DVITPGMTVA ILDDADANIA LAQAKARLVQ EKSNLARLQV GTRPEIIRQR EAELTAAQAR EREALETLES LIALQPDLIA QRQAELETVK TREKEAQDNR QRIQRLSLEG ALSERALVEA KSSADAFRSE RIRAQAALKA QETESRKAIA EARTGYDNAK SDRLRIAALL AEAQAGPTQE EIQAQQGVVS AANAAVEQAK LALERTKIKA SVSGVVQSRE ADPGDYVEVN NPIVTLVSDR SLDIFLEIPE TLSGQVTEGM RVNLFARALP NWQKATEITA VVPVANVNSR RQLVRVTLNN PPKNLLPGMA IQADLMMPIS EANTFTVPRD ALTRRGEQWL LFKVNDNQAK QLEVEMIADL GEEVMISHPQ LKQGQSVVIK GGDALKDNTV VTIVKS
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