Gene Cyan8802_3680 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCyan8802_3680 
Symbol 
ID8393022 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCyanothece sp. PCC 8802 
KingdomBacteria 
Replicon accessionNC_013161 
Strand
Start bp3758333 
End bp3759004 
Gene Length672 bp 
Protein Length223 aa 
Translation table11 
GC content43% 
IMG OID644981605 
Producttwo component transcriptional regulator, LuxR family 
Protein accessionYP_003139327 
Protein GI257061439 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.233635 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCATTAT TGATTCTCAT TGCTGATGAT GATCCAGGGA TTCGTTTAGC TGTTAAAGAT 
TACCTGGAAT TGTCGGGTTA TTCCGTAATA ACCGCCCAAA ATGGACAAGA AGCCCTATCT
TTGCTAGAAA CCTATCGTCC GCACCTCTTG GTATCCGATA TCAAAATGCC ACAAAAAGAT
GGCTACACTC TAGTGCGTCA TCTGCGTCAG CTTCCTGAAT TTCGCCTCCT TCCAGTGGTA
TTCTTGACGG AACGGGGGAC TAAAGAAGAA CGCATCCAAG GATATGAAGT AGGATGCGAT
GTCTATCTCC CTAAACCCTT TGAAATGGAT GAACTCAAAG CAGTCATCCG TAATTTAGTC
GAAAAAACCC AAATCATTCA GTCAGAATGG CGATTTTCTC AAGGGGAAAG TCAACCTAAA
CCGACATTAG AGCCTTCTCA AAAAGAAGCG ATCGCCGTTC CTTCCCTGCT TAATTCTCTA
CATCTTACCT CACGGGAAAG TCAAGTCCTC AATTTATTAG CTAGAGGGCT GTCTAACGGA
GAAATTGGAC AAAATCTGCA TTTAAGTTCC CGAACCGTGG AAAAATATGT CAGTAGCCTA
CTGAGGAAAA CCGAAACGAA CAACCGAGCC GAATTAGTGC GTTTTGCCTT AGATCATCAT
TTAATAGATT GA
 
Protein sequence
MPLLILIADD DPGIRLAVKD YLELSGYSVI TAQNGQEALS LLETYRPHLL VSDIKMPQKD 
GYTLVRHLRQ LPEFRLLPVV FLTERGTKEE RIQGYEVGCD VYLPKPFEMD ELKAVIRNLV
EKTQIIQSEW RFSQGESQPK PTLEPSQKEA IAVPSLLNSL HLTSRESQVL NLLARGLSNG
EIGQNLHLSS RTVEKYVSSL LRKTETNNRA ELVRFALDHH LID