| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cyan8802_3648 |
|---|
| Symbol | |
|---|
| ID | 8392990 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cyanothece sp. PCC 8802 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013161 |
|---|
| Strand | - |
|---|
| Start bp | 3720400 |
|---|
| End bp | 3723117 |
|---|
| Gene Length | 2718 bp |
|---|
| Protein Length | 905 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 38% |
|---|
| IMG OID | 644981574 |
|---|
| Product | TPR repeat-containing protein |
|---|
| Protein accession | YP_003139296 |
|---|
| Protein GI | 257061408 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG4995] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTTTTTC GTTACCTACG TTTTGTCTTA ATCTCTTTAA TTAGCTTGGT TTTAAGTCTA
TTTTTAACGA CCTATCCCTG GTTGTCAGTG ATTGCGTCTA GTCCTCCTCT TAACTCAATT
AATCAAAGTC AACGACTAGA ACAAGCAAAA CAATGGTATC AACAGGGTCA ACTCAACTTA
GCCATTGAAA CTTGGCGAGA AATAGTGATT TATTATGAAG AACAAGGAGA TCAACTCAAC
CAAGCGCATA TATTAACCTA TTTAGCGTTA GCTTATTCTC AATTAGGAGC CTGGAAAGAC
GCTGAAGAAT CGATTAATGA TAGTTTAACT TTATTACAAG AAACGATTAA AACTAAGACA
GAAGTTTGTT TACCAATTTT AGCAGAAGCC TTAAATGTCC AAGGAACATT ATTTTTAGCT
AAAGGGGATG CTTTATCAGC TTTATCAAGT TGGGAAAAAG CGACAAATAC CTATGAGCAA
GTCAGAGATG AATCAGGAAT TTTTCGTACT AAAATTAATC AAAGTATGGC ATTAAAAGCA
TTAGGAAGCT ATTCGAGAGC TTGCGAAAAG TTAGTAGAAA TTTTTAGCAA TAATTCATTA
ACTTGTAAAC CTCTTAATCT TAAAAAAATA AATGATTTAT TCTCAAGTTC TCTAGAGTCT
TTATCGAGTA TTAAAATAGC TGGTTGGAGT AGTTTAGGAG AAGTGCTAAA AGAAATGGCT
GAACTCGACA GTTCTCAATT CATTTTTGAA ACACTCTTGG AAAAGTCACC AGCAACAGAA
CAGCAAGCCA GCTTATTAGT TAATTTAGCA AAAACCCTAG AATTACAGGG AAATATTGAA
GAAGCTCAAG AAAAATTAAT AAGAGCGATC GCACTTTCTA AAAATTCTCA AACCCAAGTC
AAAGCGCAAC TGATACAACT TCAATTATTG ATCAATCAAA AACAATGGAA TCAAATTGAA
GCTTTGGTTA GCAATTTAGT CAATCAAATC TCTCAATTAC CCCTCAATCA AACTAAAATC
GATGCTCAAC TAACGTTAGC GCAACGCTTA ATAGAAATTA AATCACCATC GTGGCAAGAA
ATTGACCAAT TATTGCTTGA AGCTCAGAAA AATTCGGAAA CCATTGGATA TATCAGAGGA
CAAGCCTTTA GTCTCGGTAA TCAAGGAGAA CTTTATGAAC AATTAGCACT TAGTAAAGTG
TGCTATCTTA ACAACAACAA TCTTAGTCGC TACAGACAAC AAACCCCCCT AAATTGTCAT
CAAGTTTATC AATTTACAGA TATCAAACAG TTAGAAGCGA TACCAAGTCA ACTGTGGAAA
AAAGCGACTC AATTCACCGA ACAAGCCCTC AGATATTCTC AAGCCCTACA AGCCCCAGAA
ATGACCTATT TATGGCAATG GCAACTGGGG AGAATTTTAG CTGAATCGGG GCAAACAGGG
GCAATAGAAG CCTATTTAGC AGCTATTGAG ACCCTTGAAA CAATTACCAA TCAGTTAGGA
ACCAATCGGG AATTTCAATT TTCCTTTCAA GAAAAAGTAG AACCCTTGTA TCGTCAATTG
TTGAGTCTTT TGTTACCCCG CAATAATCAA GACTCGGTTC CTCAAGAACA ATTAGTAGAA
GCGCGTCAGC AAATTGAGGC CTTACAAGCA GCAGAATTGA ATAATTTCTT TAGGGATGTT
TGTGTACAAA GTGAACCTGT GGCGATTGAA GACATTGATC CCCAAGCGGC TGTGATTTAT
CCCTTAATTT TACGCGATCG CTTAGTGGTT CTTCTGAGTC TTCCCAAACA ACCCCTACAA
GCGTATGTGG TTCCGATAGA ACAAGAAGAG TTAGAAAAAA TCCTTCGGGA CTTTCGCTAC
AATATCGTCA TTCGCAGCCA ACGGGAGTTT TTTATCAATG CAGAACAACT CTATGATTGG
CTTATCCGTC CTTTTAACCA ACGATTACAG CAATCTAGCA TTAAAACTCT GATTTTTGTT
GCTGATGGCG TTTTTAGAAA TGTTCCTCTA GCAGCTTTAT ACGATGGTCA ACAATATCTC
ATCGAAAACT ATGGCGTATC TTTAACCCCT GGATTAACTT TATTGTCTCC TGAATCATTA
CAACAAAAGG GGTTAAATAC TCTGTTTGCT GGATTAACGG CTGAAACGCC CAAAGACGGC
TTTATTCCCC TATTTTACGT TCAACAAGAG TTACAGGCTG TTAAGTCCCA AGTCCCTAGT
CTCTCTTTAC TTAATGAGCA ATTTACCTTA AGCAATTTAC AAGATAATCT CCAGGATAAT
TTCTTTCCGA TTCTTCATTT TGCCACCCAT GGTCAGTTTA GTTCCCAATT TGAAGAGACG
TTTCTACTCG CCTGGAACAG TCGCATTAAT ATTTTACAAT TGGAACGACT ATTAAAAGAA
AGCGCACCCA CTCAAAGAGC AGCCATTGAA TTATTAATTC TGAGTGCTTG TGAAACCGCT
ACAGGCGATC GCCGTGCTGC TTTAGGATTA GCCGGGTTTG CGGTTCGTGC TGGTGCCAGG
AGTACTTTAG CGACGCTTTG GTCTGTTAAT GACCAAGGGA CAGCACTATT AATGGAACAG
CTTTATAATC AATTAGCTCA ACAAAAAATC TCTAAAGCTG AAGCTCTACG ACAAGCACAA
TTAGTCTTAT TAAAAGACCG TTGGTATCGA CATCCTTTTT ACTGGTCGCC TTATATTTTA
GTGGGAAATT GGCTTTAA
|
|---|
| Protein sequence | MFFRYLRFVL ISLISLVLSL FLTTYPWLSV IASSPPLNSI NQSQRLEQAK QWYQQGQLNL
AIETWREIVI YYEEQGDQLN QAHILTYLAL AYSQLGAWKD AEESINDSLT LLQETIKTKT
EVCLPILAEA LNVQGTLFLA KGDALSALSS WEKATNTYEQ VRDESGIFRT KINQSMALKA
LGSYSRACEK LVEIFSNNSL TCKPLNLKKI NDLFSSSLES LSSIKIAGWS SLGEVLKEMA
ELDSSQFIFE TLLEKSPATE QQASLLVNLA KTLELQGNIE EAQEKLIRAI ALSKNSQTQV
KAQLIQLQLL INQKQWNQIE ALVSNLVNQI SQLPLNQTKI DAQLTLAQRL IEIKSPSWQE
IDQLLLEAQK NSETIGYIRG QAFSLGNQGE LYEQLALSKV CYLNNNNLSR YRQQTPLNCH
QVYQFTDIKQ LEAIPSQLWK KATQFTEQAL RYSQALQAPE MTYLWQWQLG RILAESGQTG
AIEAYLAAIE TLETITNQLG TNREFQFSFQ EKVEPLYRQL LSLLLPRNNQ DSVPQEQLVE
ARQQIEALQA AELNNFFRDV CVQSEPVAIE DIDPQAAVIY PLILRDRLVV LLSLPKQPLQ
AYVVPIEQEE LEKILRDFRY NIVIRSQREF FINAEQLYDW LIRPFNQRLQ QSSIKTLIFV
ADGVFRNVPL AALYDGQQYL IENYGVSLTP GLTLLSPESL QQKGLNTLFA GLTAETPKDG
FIPLFYVQQE LQAVKSQVPS LSLLNEQFTL SNLQDNLQDN FFPILHFATH GQFSSQFEET
FLLAWNSRIN ILQLERLLKE SAPTQRAAIE LLILSACETA TGDRRAALGL AGFAVRAGAR
STLATLWSVN DQGTALLMEQ LYNQLAQQKI SKAEALRQAQ LVLLKDRWYR HPFYWSPYIL
VGNWL
|
|---|
| |