Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cyan8802_3611 |
Symbol | |
ID | 8392953 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cyanothece sp. PCC 8802 |
Kingdom | Bacteria |
Replicon accession | NC_013161 |
Strand | + |
Start bp | 3679300 |
End bp | 3682875 |
Gene Length | 3576 bp |
Protein Length | 1191 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 644981541 |
Product | methionine synthase |
Protein accession | YP_003139263 |
Protein GI | 257061375 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1410] Methionine synthase I, cobalamin-binding domain |
TIGRFAM ID | [TIGR00640] methylmalonyl-CoA mutase C-terminal domain [TIGR02082] 5-methyltetrahydrofolate--homocysteine methyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.134345 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATAGCA CCTTTCTTAA CTACCTCAAC AGTCCTAAGC GTCCCGTCCT TGTCTTTGAT GGTGCGACAG GAACCTCCCT ACAAACCCAA AATTTGACCG CAGAAGACTT TGGGGGACCA GAATACGAAG GATGTAATGA ATACCTCGTC CATACTAAAC CAGAAGCGGT TGAAAAGGTT CATAGAGGCT TTTTAGAAGT GGGTGCAGAT GTCATTGAAA CCGACACCTT TGGGGGAACT TCTATTGTCC TTGCAGAGTA TGATTTAGCC GATAAAGCCT ATTATCTCAA CAAAAAAGCA ACGGAAATTG CCAAGAGATT AGCTCAAGAC TATTCTACCC CAGAAAAACC CCGTTTTGTG GCGGGTTCTA TGGGGCCGGG AACCAAGTTA CCAACCTTGG GACATATTGA CTTTGATACA TTAAAAAATG CCTACGTTGA ACAAGCAGAA GGGTTATATG ATGGGGGTGC AGATTTATTC ATTATTGAAA CTTGTCAGGA TGTGCTGCAA ATTAAAGCAG CTTTAAACGC AGTTGAAGAG GTTTTTGAGA AAAAAGGTAA TCGTATTCCT ATCATGGTTT CTATTACGAT GGAAACCATG GGAACGATGT TAGTGGGAAC AGAAATTAGT GCAGCATTAG CCATTTTAGA ACCCTATAAT ATTGATATTT TGGGACTCAA TTGTGCCACC GGTCCCGAAC AGATGAAAGA ACACATTAAA TATTTATCAG AACATTCTCC TTTTATTGTG TCTTGTATTC CCAATGCGGG ACTCCCTGAA AATATTGGAG GCAAGGCACA TTATCGCCTC ACTCCCGTTG AATTGAAAAT GGCATTAATG CACTTTATTG AAGATTTAGG AGTGCAAATT ATTGGGGGCT GTTGTGGAAC CCGTCCCGAT CATATTAAAG CTTTAGCAGA ACTTTCTCAA GGGTTAACCC CTAAAGAACG TCATCCGATT TATGAACCGT CTGCTGCTTC AATTTATAGC ACTCAACCCT ATATTCAAGA TAATTCATTT TTAATTGTTG GCGAAAGATT AAACGCGAGT GGTTCTAAGA AATGCCGCGA CTTACTCAAT GTTGAAGACT GGGATAGTTT AGTCTCTTTG GCAAAATCTC AGGTTAAAGA AGGAGCACAC ATTTTAGATG TTAACGTTGA CTATGTAGGA CGAGATGGGG TGCAAGATAT GCACGAATTA GCTTCCCGTT TAGTCAATAA TGTTACCCTA CCTTTGATGC TTGACTCAAC AGAATGGCAG AAAATGGAAG CAGGATTAAA GGTGGCTGGG GGTAAATGTA TTCTCAATTC TACCAACTAT GAAGATGGAG AAGAACGCTT CTTAAAAGTG TTAGAATTAG CCAAAAAATA TGGTGCAGGA GTAGTCGTTG GAACTATCGA TGAAGAGGGA ATGGGACGTA CTGCTGATAA GAAATTTGAC ATTGCAAAAC GTGCTTATAA TGCAGCTATA GACTACGGAA TACCTTCCCA TGAAATCTTT TTTGATCCTT TAGCGTTACC CATTTCTACG GGGATAGAAG AAGACAGAGA AAATGGCAAA GCAACAATTG AATCTATTCG TCGTATTCGA GAAGAATTAC CCGGATGTCA TATTTTACTA GGGATTTCTA ATATTTCCTT TGGGTTAAAT GCTGCTGCGC GACAAGTACT CAATTCAGTG TTTTTATACG AAGCAATGCA GGTAGGGCTA GATGGTGCCA TTGTTAGCGC GAGTAAGATA CTACCCCTAG CGAAAATTGA ACCCGAATAT CAAGAAATTT GCCGAGATTT GATTTATGAT AACCGTCGCT TTGAGGGAGA TATTTGTGTT TATGATCCCT TGACTAAATT AACGGAAGTG TTTGCGGGTA AAACGACTAA AAAAGATGCC TCACAAACCG CTAATTTATC CCTAGAAGAA AGGCTAAAAC AGCATATTAT TGATGGGGAA AGGTTGGGGT TAGAAGACAC CTTAGCAGAA GCGTTAAAGC AACATCCTCC CCTTGATATT ATTAATATCT TTCTTTTGGA TGGAATGAAG GTAGTGGGTG AGTTATTTGG TTCAGGACAA ATGCAATTAC CATTCGTGTT ACAATCTGCC CAAACCATGA AAGCTGCTGT AGCTTATTTA GAACCCTTTA TGGACAAAGC AGATAGCGAT GGTAGTGGCA AAGGAACCTT TATTATTGCC ACGGTTAAAG GTGATGTTCA TGACATTGGT AAAAACCTGG TGGATATTAT CCTCTCTAAT AATGGTTATA AAGTAATTAA TTTAGGGATT AAACAACCCG TAGAAAATAT TATCCAAGCA TACCAAGAAC ACAAAGCAGA CTGTATTGCC ATGAGTGGTT TATTGGTGAA ATCAACGGCT TTTATGAAGG ATAATTTAGA GGTATTTAAT GAACGAGGAA TTACGGTTCC TGTGATTTTA GGAGGTGCTG CATTAACTCC TAAATTTGTC TATGAGGACT GTCAAAATAC CTATAAGGGT AAAGTCGTTT ACGGAAAAGA TGCCTTTTCT GATTTACACT TTATGGACAA ATTAATGCCA GCAAAATCTG CTAAAAGTTG GGATGATTTA CAGGGATTTT TAGGAGATTT TAATAATAAT AATAGCCTGT TTCAAGAAGA AAGAGCAGAA AAAGCTGCGG CTAAAATATC AGCAAAAAAT GGCAAATCTG CTACCGCAGA AACACCAAAA GTTATTGATA CTAAACGCTC AGAAGCAGTA GAATTAATAG AACCAGCAAC CCCTCCTTTC TGGGGCACTA AACTCTTAAA ACCAGAAGAG TTTGACTTAG CTGAAATTTT CTGGTATTTA GATCTACAAG CCTTAATTGC AGGTCAATGG CAATTCCGCA AACCCCAAGA ACAGTCACGG GAAGAATATG AGCAATTTTT AGCTGAAAAA GTTTATCCCA TTTTAGAGGA ATGGAAACAG AAAGTTATTA CGGATAATCT GTTACATCCG ACGGTTATTT ATGGATATTT TCCTTGTCAG TCTCAAGGAA ATAGCTTGTT AGTCTATGAC CCCGAAATTG TCCAAAACAG TAATAATAAA ATCCCCGAAA CTATCGACCC CATTTGGGTA ATTGATTTTC CTCGACAAAA ATCTGGCCGT CGTTTGTGTA TTGCCGACTT TTTTGTCCCC AAAGAATCAG GTTTAACGGA CGTATTTCCG ATGCAAGCGG TAACAGTTGG CGAAATTGCT ACAGAATACG CTCAAAAACT CTTTTCTAGT AACGATTACA CGAATTATCT CTATTACCAT GGTATGGCTG TCCAAACTGC CGAAGCATTA GCAGAATGGA CACACGCCAA AATTCGCCGG GAATTAGGAT TTAGTGACAA AGAACCCGAT AATATTCGAG AAATGCTACA ACAGCATTAT CAAGGTTCCC GCTACAGCTT CGGATACCCT GCTTGTCCTA ATATTCAAGA TCAATATAAA CAATTGGAAA TATTAGGCTG CGATCGCATT AATATGTACA TGGATGAAAG TGAACAAATC TATCCTGAAC AGTCTACCAC CGCGATTATT ACCTATCATC CTGTGGCTAA ATATTTTAAT GCGTAG
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Protein sequence | MNSTFLNYLN SPKRPVLVFD GATGTSLQTQ NLTAEDFGGP EYEGCNEYLV HTKPEAVEKV HRGFLEVGAD VIETDTFGGT SIVLAEYDLA DKAYYLNKKA TEIAKRLAQD YSTPEKPRFV AGSMGPGTKL PTLGHIDFDT LKNAYVEQAE GLYDGGADLF IIETCQDVLQ IKAALNAVEE VFEKKGNRIP IMVSITMETM GTMLVGTEIS AALAILEPYN IDILGLNCAT GPEQMKEHIK YLSEHSPFIV SCIPNAGLPE NIGGKAHYRL TPVELKMALM HFIEDLGVQI IGGCCGTRPD HIKALAELSQ GLTPKERHPI YEPSAASIYS TQPYIQDNSF LIVGERLNAS GSKKCRDLLN VEDWDSLVSL AKSQVKEGAH ILDVNVDYVG RDGVQDMHEL ASRLVNNVTL PLMLDSTEWQ KMEAGLKVAG GKCILNSTNY EDGEERFLKV LELAKKYGAG VVVGTIDEEG MGRTADKKFD IAKRAYNAAI DYGIPSHEIF FDPLALPIST GIEEDRENGK ATIESIRRIR EELPGCHILL GISNISFGLN AAARQVLNSV FLYEAMQVGL DGAIVSASKI LPLAKIEPEY QEICRDLIYD NRRFEGDICV YDPLTKLTEV FAGKTTKKDA SQTANLSLEE RLKQHIIDGE RLGLEDTLAE ALKQHPPLDI INIFLLDGMK VVGELFGSGQ MQLPFVLQSA QTMKAAVAYL EPFMDKADSD GSGKGTFIIA TVKGDVHDIG KNLVDIILSN NGYKVINLGI KQPVENIIQA YQEHKADCIA MSGLLVKSTA FMKDNLEVFN ERGITVPVIL GGAALTPKFV YEDCQNTYKG KVVYGKDAFS DLHFMDKLMP AKSAKSWDDL QGFLGDFNNN NSLFQEERAE KAAAKISAKN GKSATAETPK VIDTKRSEAV ELIEPATPPF WGTKLLKPEE FDLAEIFWYL DLQALIAGQW QFRKPQEQSR EEYEQFLAEK VYPILEEWKQ KVITDNLLHP TVIYGYFPCQ SQGNSLLVYD PEIVQNSNNK IPETIDPIWV IDFPRQKSGR RLCIADFFVP KESGLTDVFP MQAVTVGEIA TEYAQKLFSS NDYTNYLYYH GMAVQTAEAL AEWTHAKIRR ELGFSDKEPD NIREMLQQHY QGSRYSFGYP ACPNIQDQYK QLEILGCDRI NMYMDESEQI YPEQSTTAII TYHPVAKYFN A
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