| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cyan8802_3368 |
|---|
| Symbol | |
|---|
| ID | 8392704 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cyanothece sp. PCC 8802 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013161 |
|---|
| Strand | + |
|---|
| Start bp | 3432584 |
|---|
| End bp | 3435250 |
|---|
| Gene Length | 2667 bp |
|---|
| Protein Length | 888 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 41% |
|---|
| IMG OID | 644981306 |
|---|
| Product | DNA mismatch repair protein MutS |
|---|
| Protein accession | YP_003139032 |
|---|
| Protein GI | 257061144 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0249] Mismatch repair ATPase (MutS family) |
|---|
| TIGRFAM ID | [TIGR01070] DNA mismatch repair protein MutS |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.583963 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACTATTT CGACGACCGA CTCTAATCCT AACCCACCGC TTGGTAATAG TAAATCTCCC
CACAAGGATT ATCGTCCCCT TGATCCCGAA AAACTGACCC CAATGTATCA GCATTATGTG
ATGGTCAAAG AACAATATCC TAATGCTTTA TTATTGTATC GGGTCGGAGA CTTCTTTGAA
TGCTTTTTTC AAGATGCGGT GACGATTTCT CAGGAATTAG AATTAGTTTT AACCAGCAAA
GAAGGGGGAA AAGAAATTGG ACGGGTAGCC ATGACAGGGG TTCCTCACCA TGCGTTAGAT
CGTTATAGTC GGTTATTAGT AGAAAAAGGC TATGCTGTGG CTATTTGTGA TCAAGTTGAA
GACTCAGCAG AAGCAGCCGC CCAAGGACGT ATTGTTGAAC GAAAAATCAC CAAATTGCTG
ACCCCAGGAA CCTTAACCGA TGAGGGAATG TTACCTGCTA AGCGTAACAA TTTTTTAGCT
GCCATTGTAA TCGCGGGAAA CCATTGGGGA CTAGCTTATG CAGACATTTC AACAGGGGAA
TTTTTTACCA CCCAATCCCA AGATATTGCT AATCTAAACT TAGAATTATT ACGACTGCAA
CCGTCAGAAA TTTTAATCCC CACTAATGCC CCGGATATTA ATAGTTTACT GCGTCCCGGG
GAAAAATCCG AGTATTTAGT GGATGGTTTG CCCGACTGTT TTTGTTATTC CCTGCGATCG
CAAACCCATT TCAGTTTAAA TGAAGCCAAA CCTCGACTAT TAATTACGTT TAATATACGT
TCCCTTGAAG GAATGGGATG CGAACATTTA CCCCTAGCTA TTCGTGCCGC AGGAGGACTA
TTACAATACA TCGAAGATAC CCAGAAAGCC CATCAAGTTC CCCTACAACC CCTACGAACT
TACAATCAGG TTGATTTTCT TATTTTGGAT CATCAAACCC GCCGTAACCT CGAAATAACT
CAAACGGTAA GAGATAGCAC GTTTCATGGT TCATTACTAT GGGCAATTGA TCGGACTTGT
ACCGCCATGG GAGGACGAGC CTTGCGTCGT TGGGTATTGG AACCTTTATT AACGATTAAA
GGCATTGAAG CGCGACAAAA TACTATCCAA GAATTAGTGG AAAACCCCTC TCTACGGCAA
GATTTACGTC AGTTATTACG CAGTATTTAT GACTTAGAAC GTATTACTGG GAGGGTAGGT
TCAGGAACTG CTAATGCGAG GGATTTATTA TCCTTAGCCG AGTCATTAGT AAGGTTAACA
GACCTAGCAG AATTAGCCAA TCAAGGTACT TCGCCCTATC TAAAAGCCTT ACAAAAAATT
CCCCCTGAAT TGGAACAATT AGGCAAGTAT GTCATCGATC ATTTAGTAGA ATCTCCCCCC
CTTCATTTAA AAGATGGGGG AGTCATTCGT GATGGCATTA ATACTGACTT AGATGCCATG
CGTCAGCGTC TCGATGATGA TCGTCAATGG TTAGCCAATT TGGAACTAAC CGAACGACAA
AAAACCGGAG TCTCTAACTT AAAAGTTGGC TACAATAAAA CCTTTGGTTA CTATATTAGT
CTGCCCCGTA GCAAAGCCGA ATTAGCCCCC AAGAATTACG TTAGAAAACA AACGCTAACT
AACGAAGAAA GATATATTAC TCCTGAATTG AAGGAACGAG AAACCCGTAT TTTAACTGCA
CAAGATGATC TCAATCAATT AGAATATGAA ATCTTTACTC AATTGCGGTC AAAAGTAGCA
GAAAAAGGGC AAGAAATTCG CAGTATTGCT AAAGCTGTCG CAGCCATTGA TGTCTTAGCC
GGGTTAGCAG AAGTTGCCGT TTATCAAGGC TATTGTCGTC CTGAAATTGT CGAAGGAAGG
GCAATAGAAA TTACTGAGGG AAGACATCCC GTTGTTGAAC AATCTTTAGC CGCCGGGTTG
TTCGTTCCTA ATTCAACTAA AATGGGGAAT ACTGAAGCCA ATAATTACCC TGATTTAATT
ATTTTAACGG GTCCAAATGC CAGTGGAAAA AGTTGTTATT TAAGACAAGT GGGACTGATT
CAATTAATGG CACAAACCGG AAGTTTTGTT CCTGCTAAAA GTGCAAAATT AGGGATTAGC
GATCGCATTT TTACCCGTGT CGGGGCAGTG GATGATTTAG CCACAGGACA ATCAACCTTT
ATGGTAGAAA TGAATGAGAC AGCTAATATT CTCAATCATG GGACAAATAA GTCTTTAATA
TTATTAGATG AAATTGGAAG AGGAACGGCT ACCTTTGACG GACTTTCTAT TGCTTGGGCA
GTGGCAGAAT ATTTAGCAAC CGAAGTTCAA GGAAGAACAA TTTTTGCTAC CCATTACCAT
GAATTAAATG AATTAGCGTC TATCCTTTCT AACGTCGCTA ACTATCAAGT AACCGTACAA
GAATTGCCCA ATGAAATCAT CTTTTTACAC CAAGTTCGTC CAGGGGGTGC AGATAAATCT
TACGGGATAG AAGCAGGAAG ATTAGCAGGT TTACCCAGTT CAGTGATTAA ACGGGCAAAA
CAAGTGATGA GTCAGATTGA AAAACATAGT AAAATTGCCC TAGGATTACG CAAAGGAATT
AAAAAAGTTA ACCCCGTTAA ACAAACAGAA ATTCAAGGGG AATTGATCGA ACAATTAGAT
ATTTTTGGAG ACAGTGAATC ACGGTAG
|
|---|
| Protein sequence | MTISTTDSNP NPPLGNSKSP HKDYRPLDPE KLTPMYQHYV MVKEQYPNAL LLYRVGDFFE
CFFQDAVTIS QELELVLTSK EGGKEIGRVA MTGVPHHALD RYSRLLVEKG YAVAICDQVE
DSAEAAAQGR IVERKITKLL TPGTLTDEGM LPAKRNNFLA AIVIAGNHWG LAYADISTGE
FFTTQSQDIA NLNLELLRLQ PSEILIPTNA PDINSLLRPG EKSEYLVDGL PDCFCYSLRS
QTHFSLNEAK PRLLITFNIR SLEGMGCEHL PLAIRAAGGL LQYIEDTQKA HQVPLQPLRT
YNQVDFLILD HQTRRNLEIT QTVRDSTFHG SLLWAIDRTC TAMGGRALRR WVLEPLLTIK
GIEARQNTIQ ELVENPSLRQ DLRQLLRSIY DLERITGRVG SGTANARDLL SLAESLVRLT
DLAELANQGT SPYLKALQKI PPELEQLGKY VIDHLVESPP LHLKDGGVIR DGINTDLDAM
RQRLDDDRQW LANLELTERQ KTGVSNLKVG YNKTFGYYIS LPRSKAELAP KNYVRKQTLT
NEERYITPEL KERETRILTA QDDLNQLEYE IFTQLRSKVA EKGQEIRSIA KAVAAIDVLA
GLAEVAVYQG YCRPEIVEGR AIEITEGRHP VVEQSLAAGL FVPNSTKMGN TEANNYPDLI
ILTGPNASGK SCYLRQVGLI QLMAQTGSFV PAKSAKLGIS DRIFTRVGAV DDLATGQSTF
MVEMNETANI LNHGTNKSLI LLDEIGRGTA TFDGLSIAWA VAEYLATEVQ GRTIFATHYH
ELNELASILS NVANYQVTVQ ELPNEIIFLH QVRPGGADKS YGIEAGRLAG LPSSVIKRAK
QVMSQIEKHS KIALGLRKGI KKVNPVKQTE IQGELIEQLD IFGDSESR
|
|---|
| |