| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cyan8802_3254 |
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| Symbol | |
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| ID | 8392590 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cyanothece sp. PCC 8802 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013161 |
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| Strand | - |
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| Start bp | 3330338 |
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| End bp | 3332293 |
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| Gene Length | 1956 bp |
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| Protein Length | 651 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 644981201 |
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| Product | squalene-hopene cyclase |
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| Protein accession | YP_003138927 |
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| Protein GI | 257061039 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1657] Squalene cyclase |
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| TIGRFAM ID | [TIGR01507] squalene-hopene cyclase
[TIGR01787] squalene/oxidosqualene cyclases |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGACAC AAAACAGAGT AACGTCAACT CAAAAAGTTG AGCTATCAAA CCTCACTCAA
GCTATCATCG CCAGTCAAAA TTATATACTG TCCCGACAAT ATCCTGAAGG ATACTGGTGG
GGTGAACTAG AATCGAATAT TACCCTAACT GCGGAAACTG TTTTACTCCA CAAAATTTGG
AAAACCGACA AAACCCGTCC TTTCCATAAA GTAGAAACCT ATCTGCGTCG TCAACAAAAT
GAACAGGGGG GATGGGAACT TTTTTATGGA GATGGGGGAG AATTAAGTAC CTCTGTTGAA
GCATATATGG CACTCCGTTT ATTGGGAGTT ACCCCAGAAG ATCCTGCCCT AATTCGCGCT
AAAGACTTTA TCCTTAGTAA AGGGGGTATT AGCAAAACCC GCATTTTTAC TAAGTTTCAT
CTAGCATTAA TTGGCTGTTA TGATTGGAAA GGCATCCCTT CTATTCCCCC TTGGATTATG
CTTTTTCCTG ATAACTTCCC TTTCACGATT TATGAGATGT CGAGTTGGGC TAGGGAAAGT
ACCGTTCCTC TGCTAATTGT CTTTGATAAA AAGCCTATTT TTGAGATTGA ACCAGCCTTT
AATCTTGATG AATTGTATGC AGAAGGTGTT GAAAATGTCA AGTATGCTTT ACCGCGTAAT
CATAATTGGT CAGACATCTT TTTAGGACTG GATAAATTGT TTAAATGGAC GGAAAAAAAT
AACTTAGTTC CTTTCCATAA AAAGAGTCTC CAAGCTGCTG AAAAATGGAT GTTAAACCAT
CAACAAGAAA GCGGAGATTG GGGAGGAATT ATGCCGCCGA TGGTTAACTC CTTAATTGCC
TTCAAAGTGC TGAATTACGA TGTTGCTGAT CCCTCGGTTC AACGGGGTTT TGAAGCCATT
GATCGCTTTT CCATTGAAGA AGAAGATACC TATCGGGTTC AAGCTTGTGT GTCTCCTGTT
TGGGACACCG CATGGGTGAT TAGAGCTCTA GTTGATTCAG GGTTAAAACC CGATCATCCT
TCGTTAGTTA AAGCGGGTGA ATGGTTACTG GATAAACAAA TCCTTGAATA CGGAGATTGG
GCAATTAAAA ATAAGCAGGG AAAACCCGGC GGTTGGGCAT TTGAATTTAT TAACCGTTTC
TATCCCGATC TCGATGATTC TGCCGTTGTT GTCATGGCGT TAAATGGCAT CAAATTACCC
GATGAAAATC GCAAAAAAGC AGCTATAAAT CGCTGCCTAG AATGGATGGC AACCATGCAA
TGTAAACCGG GGGGGTGGGC AGCTTTTGAT GTCGATAATG ATCAAGCTTG GATTAATGAA
ATTCCCTATG GCGATCTTAA AGCGATGATC GATCCCAATA CCGCAGATGT CACCGCTAGG
GTATTAGAAA TGGTGGGATC GTGTGGCTTG AAAATGGATG AAAACCGCGT TCAAAAAGCC
CTATTTTATT TAGAAAAAGA ACAGGAATCT GATGGGAGTT GGTTTGGACG ATGGGGAGTT
AACTATATCT ACGGAACCAG TGGTGTTTTA TCAGCATTAG CGGTTATTGC ACCCAATACC
CATAAACCTC AGATGGAAAA AGCCGTTAAT TGGTTAATTA GCTGCCAAAA TGAGGACGGA
GGATGGGGAG AAACCTGTTG GAGTTATAAC GATTCTTCCC TCAAAGGAAC AGGGATTAGT
ACCGCTTCTC AAACCGCTTG GGCAATTATT GGATTATTGG ATGCGGGAGA AGCCTTAGAA
ACCTTAGCCA CAGATGCCAT AAAACGGGGA ATTGACTATT TATTAGCCAC CCAAACCCCT
GACGGAACCT GGGAAGAAGC GGAGTTCACT GGAACAGGGT TTCCCTGTCA TTTCTATATC
CGTTATCACC TCTATCGTCA TTATTTTCCT TTAATTGCTT TGGGACGTTA TTGGAAAATT
GGGTTAAAAA CCCCATCGGT CATTCCCCTC AACTAA
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| Protein sequence | MQTQNRVTST QKVELSNLTQ AIIASQNYIL SRQYPEGYWW GELESNITLT AETVLLHKIW
KTDKTRPFHK VETYLRRQQN EQGGWELFYG DGGELSTSVE AYMALRLLGV TPEDPALIRA
KDFILSKGGI SKTRIFTKFH LALIGCYDWK GIPSIPPWIM LFPDNFPFTI YEMSSWARES
TVPLLIVFDK KPIFEIEPAF NLDELYAEGV ENVKYALPRN HNWSDIFLGL DKLFKWTEKN
NLVPFHKKSL QAAEKWMLNH QQESGDWGGI MPPMVNSLIA FKVLNYDVAD PSVQRGFEAI
DRFSIEEEDT YRVQACVSPV WDTAWVIRAL VDSGLKPDHP SLVKAGEWLL DKQILEYGDW
AIKNKQGKPG GWAFEFINRF YPDLDDSAVV VMALNGIKLP DENRKKAAIN RCLEWMATMQ
CKPGGWAAFD VDNDQAWINE IPYGDLKAMI DPNTADVTAR VLEMVGSCGL KMDENRVQKA
LFYLEKEQES DGSWFGRWGV NYIYGTSGVL SALAVIAPNT HKPQMEKAVN WLISCQNEDG
GWGETCWSYN DSSLKGTGIS TASQTAWAII GLLDAGEALE TLATDAIKRG IDYLLATQTP
DGTWEEAEFT GTGFPCHFYI RYHLYRHYFP LIALGRYWKI GLKTPSVIPL N
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