Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cyan8802_3209 |
Symbol | |
ID | 8392544 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cyanothece sp. PCC 8802 |
Kingdom | Bacteria |
Replicon accession | NC_013161 |
Strand | - |
Start bp | 3282310 |
End bp | 3282969 |
Gene Length | 660 bp |
Protein Length | 219 aa |
Translation table | 11 |
GC content | 33% |
IMG OID | 644981155 |
Product | Haloacid dehalogenase domain protein hydrolase |
Protein accession | YP_003138882 |
Protein GI | 257060994 |
COG category | [R] General function prediction only |
COG ID | [COG0546] Predicted phosphatases |
TIGRFAM ID | [TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED [TIGR01549] haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACAGTTA AGGTAATTGT TTTTGATTTT GATGGCACAC TAGCCGATAC TTACGAAACT TTTGTCGAGA TTGCTAATAG TTTATCAGGA GAATTTGGCT ATAAACCAAT TAATTTAGAA GAACAACAGA AACTCAAGCA TTTAAGTGCT AGGGATATTA TTAAACAGTC AGAAATTCCT CCCTTGAAAA TTCCGTTTAT TTTAAGGCGA GTTAAATCTG AGTTGAATAA CAAAATTCAT CATCTAAAAC CGATTTCTAA CATTCCCTCC TCTCTCAAGC AACTAAAAGA AAGAGGGTAT TTGTTGGGAA TTATTACGTC AAATATTCAA GAAAATGTCA AGGATTTTCT AGACAACAAT GGGTTAACGA ATTTATTTGA TTTTGTTTAT TCTGGAACTG CTTTATTTGG CAAAGATAAG GTGATTAATA AACTTCTCAA AGAACGAAAA TTAAGGAATA CTGAAGTTAT TTATGTAGGA GATGAAACTA GAGATATTCA GTCAGCAAAG AAAAGCCAAG TTAGTGTCAT TGCAGTAGCC TGGGGATTTA ATTCCCCAGA AATTCTGGCT GAATATCAGC CAGATTTTTT GATTTATCAC CCAGAGGAAT TAATTGAAGT CATCGAAAAT TGCCAAGAAA GTTTTACACA GGTACTTTAG
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Protein sequence | MTVKVIVFDF DGTLADTYET FVEIANSLSG EFGYKPINLE EQQKLKHLSA RDIIKQSEIP PLKIPFILRR VKSELNNKIH HLKPISNIPS SLKQLKERGY LLGIITSNIQ ENVKDFLDNN GLTNLFDFVY SGTALFGKDK VINKLLKERK LRNTEVIYVG DETRDIQSAK KSQVSVIAVA WGFNSPEILA EYQPDFLIYH PEELIEVIEN CQESFTQVL
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