| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cyan8802_2776 |
|---|
| Symbol | |
|---|
| ID | 8392103 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cyanothece sp. PCC 8802 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013161 |
|---|
| Strand | - |
|---|
| Start bp | 2799918 |
|---|
| End bp | 2803346 |
|---|
| Gene Length | 3429 bp |
|---|
| Protein Length | 1142 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 644980730 |
|---|
| Product | methyl-accepting chemotaxis sensory transducer with GAF sensor |
|---|
| Protein accession | YP_003138465 |
|---|
| Protein GI | 257060577 |
|---|
| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0840] Methyl-accepting chemotaxis protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 0.380177 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAACCC CTATGAAACC GGAAAACATT CAACAGCTAT CAGTAAACAA TAAACAGTTC
TCAGGAGTCA AAATCTCTCC CCCTCCCCCC CTCTCCCCCT CCCCTCCTCT CTCAACTCCC
GACTCCCGTC GTCAGTCTCG CAGTCTATGG CAACGGTTCT CTGACCTGCC GATCACCCAG
AAAACCCAAT TAGCGACAGC TTTGATGGTA GTTGCCATTG GCGGTTGTAT TGGAGTCGGG
TACGCTTCGT TAGTCAGTAG TTTGCGTTCT CAGTTGCGCT ATCAAACTCA GTCCCAATTG
GCAGTAACAG CGCTGAACTA TCAAAGGGAT TTGGAGGATA TGGGGTTGGA TTTTATTACC
CAAGCAGACA ATCCAACCAT CATTAATGCT GCTGTCAACT CTGCTAAGGG TAAACCCTTA
TCTCCAGAGC TTCGTAATCG TCTGAAGTCC ATTCTCGATA GTGAGTTGAA AATTCGCAAG
CTCGAATATG CAACGTTGGT GGGTAACGAT GGCCGAATTA TTGTTAATGC TAATGCTGAT
CGCGCGGGAC AAGTTTTTGA ACCCAAAAAG CTAGTTAATC AAGTTTTTAA GAATCCGCAG
CAACTCCGTA CCAGTGAGAT TGTGCCTTGG TTAGAATTGA CTCTTGAAAA ACCCCTATTA
CCGGAGGGCT TTTCTAGTCA AGATGCTTTA ATACGCTATA CCATTACTCC CGTTAAACTT
CCTGGTAGCC AAAAGGTCAT TGGAGCGTTA GTGTCAGGGG ATATTGTTAA TCGCAATTTA
TCCATTGTGG AGCAAACCGT TGAAGCGTTT CAAAGTGTGG GCTATAGTGC CATCTATCTC
CATCAAACCT CGACGGGAAC TTTTTCGTTA GCTACTTCTT TTGGTAAAAC GGAAATGCGA
CAACCGACGA TGAACCTAGA CTGGGTTCCT CCTTCTCTTT TGGCTGAAGC CGTCGCGGCT
AAGGGGAAAG TAGTTTCTGG GCGTGGTTTG GTCGGGAAGC GCAATTATAC CTTTTCAGCT
AAGGCGTTAC CCAATAGTCA AGGCAATACG GTAGCAGTCT TGGTGTTTGG TGATCCTGAA
TTAGCTCTAG AACAGATTAT TAAACAAAAT TTATTGCTAC AGTTGGGGTT ATCAGGGGTT
GCCCTGGTGA TTATTTTGGG GGTAACTTGG GCGATCGCTA AAGCTATTAC TCATCCCATT
AAACGTCTTG AGGAAGTCAC AGAAGCCTTT GCTCAAGGGA ACTATCAGGT ACGCGCTAAT
GATAGGAATC AAGATGAGTT AGGACGGTTA GCCAAGGCCT TTAATCGGAT GGCCGAGAGC
ATCGTTACCA ATAATGATCG GATTCGTCAA GAAACGGAAC TGTTTCGCTT TCTCTCTGAG
TTACAGACCC AAGACTTTAC GTTATCGGTA ACAGACGGAG AAAACACTCT AAAACCCTTA
GAAAATTGGT TTTCTAGGGC ATTAGCCAAA GCACGGCAAC TGTTGGGGGC CGATCGCTTG
TTAATCTATC GTTTTGCCCC CGATGGACGG GGAACCATTG ACTATGAATC CCTTGGTTCA
GGGGTTAGTA GTACCCTCAA TCAACAGATT GGGGATGCTT GTATTCCGGC GGAATTACTC
GAAGCTTATC GGGTTGATCG GGTAGCGATG ATCAATAATC TCAGTGAGGT CACGTTAGAT
CCCGATCACC TGGAACTCTT AACCCGATTG GGAGTTCAAG CTAATTTAGT CATTCCGATT
TTAAATCAAG GCAATTTATT TGGGTTACTG ATAGCTCATC AATGTTTCTC TCCCCGTCAG
TGGGAAGAAC GGGATATTAA TTTCCTTAAA CAGTTATCGA CCCAATTCCA GGTCATTTTA
AACCGATTGA GTTTGAGCCA TCAACAAGCC ATTGACGCAA GGTTAGCCCA ATCTCTCAAA
ACGATTACTC AGCGCATTTC CGGGGCATTT GACCTAGAAA ATCTGTTTGC GATCGCAGTT
AATAACTGTC GAGAAGCCTT GGCAACCGAT CGCGTCATTG TCTATTGTTT TGATGAAAAT
TGGAAGGGAA CAGTTACGGC TGAGTCGGTT CGAGCCGGCT ATCCCCAAGC GTTGGGAGCC
CTCATTGCTG ATCCCTGTTT TGCGGAGCGA TACGTCGAAA AGTACCGCCA AGGTCGGGTT
CAAGCTACTA CCAATATTCA AACGGCCGGA CTGACGCGAT GCCATCTCCA GCAACTCGAA
CCCTTTGGGG TAAAAGCCAA TTTAGTCGCG CCTATCGTCG TCTCTGAACA ACTCTATGGC
TTATTAATTG CCCATCATTG TGAGTCCCCC CGCTATTGGG ATCAGTCTGC TATTGATTTT
ATGACCCAGG TAGCTATCCA AGTGGGGGTT GCCCTAGAAC GGGCGAATTT ACTCAATGAA
CAGGTAGAGA ATTTGGAACA GCAACGGCAA GCCAAGGAAC GTCTACAACA GCAAGCCCTA
GAATTACTGA TGCAGGTTGA ACCCATTAGT CGGGGTGATC TGACGGTTAG GGCAAAAGTA
ACCCCCGATG AAATTGGCAC GATCGCTGAC TCCTATAATG CGACGGTACA AAACCTGCGA
CGCATTGTTC AGCAAGTTCA GCAAGCCTCC CATCAACTGT CCACCACTAG CGATAAGAAT
GAACTCTCGA TTCAATCCTT AGCCAGTGAG GCTTTACGTC AGGTGGAAGA AATCGCTCAA
GCGAGCCAAA AATTACAGGC AATGAGTGAT TCGATTAAAA CCGTGGCTCA TAATGCTCAA
AATACCCTCG AAGCTTTCTC CCAAGCCAGT CAAACCGTTG AAGAAGGGGA AATGGTGATT
AATCAAACCG TTGAAGGGAT GATGTCCATT CGAGAAACGG TGACGCAAGC AGCCGAAAAA
GTACAACACC TCTCGTCAGC GTCTGAGCAA ATTTCTAAGG CTGTGAGTCT GATTAGCCGT
TTTGCGGCTC AAACCCATTT ATTAGCCCTG AAAGCGTCCA TTGAAGCTGC TAGGGCAGGT
GAGGAAGGAC GAGGCTTTGC GGTGATCGCC GATGAGGTGC GTACCTTGGC TGCCCAGTCG
GCGGAAGCGA CGGCGGAAAT TGAAGCGTTG GTGAGCAATA TTCAAGGGGA AACCAAAGAA
GTCGCCCAAG CGATGACCAC GGGACGGGAA CAAGTGATGA TTGGCTCCAA TTTGGTTGAA
CAAACCCGTC ACAGTCTTAA TCAAATGGTT TCTACCAGTG AACAAATTCA ACAGTTGGTG
AAATCTATTT CTCAAGCGGC GATCGCCCAA TCTGAAGCCT CTGAAACCGT TACCCAAGTG
ATGGAAGAAG TTTCCGCGAT CGCTCACCAT ACCTCCTCTT CTGCTAAATC CGTTTCTAAC
TCCTTCAAAG ACTTATTAAC GGTCGCTCAT GAACTCCAAA CCAGTGTGGA TCAATTTAAG
GTCAATTAG
|
|---|
| Protein sequence | MKTPMKPENI QQLSVNNKQF SGVKISPPPP LSPSPPLSTP DSRRQSRSLW QRFSDLPITQ
KTQLATALMV VAIGGCIGVG YASLVSSLRS QLRYQTQSQL AVTALNYQRD LEDMGLDFIT
QADNPTIINA AVNSAKGKPL SPELRNRLKS ILDSELKIRK LEYATLVGND GRIIVNANAD
RAGQVFEPKK LVNQVFKNPQ QLRTSEIVPW LELTLEKPLL PEGFSSQDAL IRYTITPVKL
PGSQKVIGAL VSGDIVNRNL SIVEQTVEAF QSVGYSAIYL HQTSTGTFSL ATSFGKTEMR
QPTMNLDWVP PSLLAEAVAA KGKVVSGRGL VGKRNYTFSA KALPNSQGNT VAVLVFGDPE
LALEQIIKQN LLLQLGLSGV ALVIILGVTW AIAKAITHPI KRLEEVTEAF AQGNYQVRAN
DRNQDELGRL AKAFNRMAES IVTNNDRIRQ ETELFRFLSE LQTQDFTLSV TDGENTLKPL
ENWFSRALAK ARQLLGADRL LIYRFAPDGR GTIDYESLGS GVSSTLNQQI GDACIPAELL
EAYRVDRVAM INNLSEVTLD PDHLELLTRL GVQANLVIPI LNQGNLFGLL IAHQCFSPRQ
WEERDINFLK QLSTQFQVIL NRLSLSHQQA IDARLAQSLK TITQRISGAF DLENLFAIAV
NNCREALATD RVIVYCFDEN WKGTVTAESV RAGYPQALGA LIADPCFAER YVEKYRQGRV
QATTNIQTAG LTRCHLQQLE PFGVKANLVA PIVVSEQLYG LLIAHHCESP RYWDQSAIDF
MTQVAIQVGV ALERANLLNE QVENLEQQRQ AKERLQQQAL ELLMQVEPIS RGDLTVRAKV
TPDEIGTIAD SYNATVQNLR RIVQQVQQAS HQLSTTSDKN ELSIQSLASE ALRQVEEIAQ
ASQKLQAMSD SIKTVAHNAQ NTLEAFSQAS QTVEEGEMVI NQTVEGMMSI RETVTQAAEK
VQHLSSASEQ ISKAVSLISR FAAQTHLLAL KASIEAARAG EEGRGFAVIA DEVRTLAAQS
AEATAEIEAL VSNIQGETKE VAQAMTTGRE QVMIGSNLVE QTRHSLNQMV STSEQIQQLV
KSISQAAIAQ SEASETVTQV MEEVSAIAHH TSSSAKSVSN SFKDLLTVAH ELQTSVDQFK
VN
|
|---|
| |