| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cyan8802_2578 |
|---|
| Symbol | |
|---|
| ID | 8391904 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cyanothece sp. PCC 8802 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013161 |
|---|
| Strand | + |
|---|
| Start bp | 2605942 |
|---|
| End bp | 2608137 |
|---|
| Gene Length | 2196 bp |
|---|
| Protein Length | 731 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 34% |
|---|
| IMG OID | 644980539 |
|---|
| Product | O-linked N-acetylglucosamine transferase SPINDLY family-like protein |
|---|
| Protein accession | YP_003138275 |
|---|
| Protein GI | 257060387 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG3914] Predicted O-linked N-acetylglucosamine transferase, SPINDLY family |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.17426 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAATTGGC ATCCTCTTCC TTATCAAGCA TTACTCAACG GTAATTATTC GGCTATTTCT
GAATTTTATG AGGAAGCAAT AGAACAAGAA CCTGAGATCA TTTCTCACTA TTGGTATTTG
GGTTTATCCT ATTTGCTTCA AGAACAAGAA GAAGCAGCAC AAAGTACCTG GATTTATGCG
ATGACTCAGG GTTTCGGTGA AGAAATGGAG TCAGAAATGT TGACTCTGGG ACAAATATTA
AATACCGAAG CTGAACGACA AGAAACGATA CAAAATTATG CTTTAGCCTT ATTAATTAGA
AGAAATTTAC AGGAACTTGA TGCAAGTTCA ATTAACAATC TTTTACGAAT GGTTAAACTT
GAAATTCTTG CTAACAGTTT TAGCCCAAAG CTATTATATG ATTGGCAAGT TTTTGAGTTG
TTAAATGATG CTGATTCTAA TTGCATTGAT AGAGATTTAT TGTTAGAAGT TGTGATTCAA
GTGCTTGAAT TTAGTACATT AGCATCTATT GATTTTGCAG AAATAAGCTT GCCTCATATT
ATCAACAAAA ATGACTTGAT AGCCCAGGTA ATGTCAATAG CAATCCGCAT GGGATATGAT
GAAGACAAAC CAACCTATGC AGCATATCTA ACAGAATTTT GTCTTAAAAT TGAACCTCAA
AATATTAATT TACTCAGTGA ATTATTAACA TTTTACTTGA GAAGTAATAA AACCGATGAA
ATCATCAAAA CTGCTCAGAG AATTTATAAC ATTTATATTA ATGATGAAGC TTGTTCAACC
ATATCTTTAA AATTATACAG TATTTATCGA GCTATACTTG GTTTCTTGCA TTCAGGAGGT
TGGCTAGAAA TAGATCCTAT ACTTGAGCAG TATAAAAGCT TGCTTTTAGA AGTCGTCAAC
AATCCTCCTG AAATTATTGA AAATCACCTA ATAGATCGTT GGATAGAAAT TGCTGCTCCT
TTACTTTACT TAGCTGATAA TCCTTCAGAA AATCGTCGTT TGATTAATGG AATATCTCAA
ATTTTTGAAA AGCAGGTAAA GATGAAGTTA AAGACTCAAA AATTTTACTT GGAAACAACA
AAGATTAAGC CCACAAAAAA AATTAAAATA GGTTATATTG CAAGTACTCT TAGAAAAAAT
TCAGTAGGTT GGTTAAGTCG CTGGCTATTT CATTATCATA ACCGAGAACA ATTTCAAATT
GGCCTATATT TAATGAATCA ACCCGAAGAT GAACTGACTC AAAACTGGTT TCGGAATAAA
GTTGATTACA CCTATAATTT TGGGAGAGAT ATTCAAGAAA TCTTACAGCA AATTCAAGCA
GATGATCTCG ATATTCTCGT TGACTTAGAT AGTTTAACCA ATAATGTCAC TTGTCAAGTT
TTAGTCTTCA AACCCGCGAA AATTCAAGTA TCTTGGTTAG GATATGATAG TTCAGGATTA
TCTACCCTTG ACTATTTTAT TAGCGATCCT TACGTTTTAC CCGAAAATGC CCAAGACTAT
TATCAAGAAA ACATTTGGCG TTTACCCCAA ACCTATCTAG CGGTTGATGG ATTTGAAATC
GGAGAACAAA CCCTAACCAG AGAACAATTA AATATTCCTG AAGATGCTAT CATTTATTGG
ACTGGACAAA ACGGATTTAA ACGCCATCCT GATATGATTA ATTGTCAGAT GCAAATTCTC
CAAGACGTTC CCAATAGTTA CCTATTAATT AAAGGAATTG GGAATGATGA GAAAATTCAA
CAATTGTTTA AAACCATCGC TTTAAAATAC CAAGTTAGTC CTGATAGATT GCGATTTTTA
CCAATCGTTG CTGATGAACT CACCCATCGT GCCAATTTAC AAATCGCTGA TATCGTATTA
GATACCTATC CCTATAATGG TGCAACAACA ACCCTAGAAG TCCTTTGGAT GGGTATTCCT
TTAGTAACGA GAGTAGGAGA ACAATTTGCT GCGAGAAATA GCTATACTTT TATGACCAAT
GTGGGTTTAA CTGAAGGTAT TGCTTGGACT AATGAAGAGT ATATTGACTG GGGTATTCAA
TTGGGAAAAA ATGAAGCTTT GAGGCAACAA GTACGAGAAA AATTACAACA GTCTCGACAG
ACTTCTCCCG TCTGGAATGC TAAAATCTTT ACCCAAGAAA TGGAAAAAGC TTATCAAAAA
ATGGTAAAAA ACTATCTTGA CAATACCACT GCTTAA
|
|---|
| Protein sequence | MNWHPLPYQA LLNGNYSAIS EFYEEAIEQE PEIISHYWYL GLSYLLQEQE EAAQSTWIYA
MTQGFGEEME SEMLTLGQIL NTEAERQETI QNYALALLIR RNLQELDASS INNLLRMVKL
EILANSFSPK LLYDWQVFEL LNDADSNCID RDLLLEVVIQ VLEFSTLASI DFAEISLPHI
INKNDLIAQV MSIAIRMGYD EDKPTYAAYL TEFCLKIEPQ NINLLSELLT FYLRSNKTDE
IIKTAQRIYN IYINDEACST ISLKLYSIYR AILGFLHSGG WLEIDPILEQ YKSLLLEVVN
NPPEIIENHL IDRWIEIAAP LLYLADNPSE NRRLINGISQ IFEKQVKMKL KTQKFYLETT
KIKPTKKIKI GYIASTLRKN SVGWLSRWLF HYHNREQFQI GLYLMNQPED ELTQNWFRNK
VDYTYNFGRD IQEILQQIQA DDLDILVDLD SLTNNVTCQV LVFKPAKIQV SWLGYDSSGL
STLDYFISDP YVLPENAQDY YQENIWRLPQ TYLAVDGFEI GEQTLTREQL NIPEDAIIYW
TGQNGFKRHP DMINCQMQIL QDVPNSYLLI KGIGNDEKIQ QLFKTIALKY QVSPDRLRFL
PIVADELTHR ANLQIADIVL DTYPYNGATT TLEVLWMGIP LVTRVGEQFA ARNSYTFMTN
VGLTEGIAWT NEEYIDWGIQ LGKNEALRQQ VREKLQQSRQ TSPVWNAKIF TQEMEKAYQK
MVKNYLDNTT A
|
|---|
| |