| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cyan8802_2572 |
|---|
| Symbol | mnmA |
|---|
| ID | 8391898 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cyanothece sp. PCC 8802 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013161 |
|---|
| Strand | - |
|---|
| Start bp | 2600164 |
|---|
| End bp | 2601213 |
|---|
| Gene Length | 1050 bp |
|---|
| Protein Length | 349 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 42% |
|---|
| IMG OID | 644980533 |
|---|
| Product | tRNA-specific 2-thiouridylase MnmA |
|---|
| Protein accession | YP_003138269 |
|---|
| Protein GI | 257060381 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0482] Predicted tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase, contains the PP-loop ATPase domain |
|---|
| TIGRFAM ID | [TIGR00420] tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 0.633638 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAATAAAG TTGTTGTCGG TTTGTCAGGA GGGGTTGATA GTTCCGTTGC TGCTGCTGTT
TTGCATCATC AAGGCTATGA AGTCATTGGG TTAACCCTAT GGTTGATGAA AGGGAAGGGA
CAATGCTGTT CCGAAGGGAT GGTGGATGCG GCTTTTATTT GCGAACAATT GGGCATTCCT
CATCATATTG TCGATAGTCG AGACGTATTT CAAGCCAATA TCGTTAATTA TTTAGTGTCA
GGCTATGAAG CGGGTATTAC CCCCCTTCCT TGTTCCCAAT GTAATCGGGC GGTGAAATTT
GGTCCGATGT TGGATTATGC TAGACAAGAG TTAGGATGCG ATCGCATTGC CACTGGACAT
TATGCCCGCA TTCGTTACGA TGAAATAAGC CAACGCTATC AATTATTACG CGCCATTGAT
CGCAATAAAG ATCAGTCCTA TTTTCTCTAT GATCTCTCCC AAGAAATGTT AGCGGGAACG
GTGTTTCCTT TAGGGGATCA AACCAAAGAA GACACCCGAC GCATTGCTGC GGAATTTGAC
TTAAAAACCG CTAGTAAACC AGAAAGTCAA GATTTATGTT TAATTGAAGC CCACGGTTCT
ATGAAGACCT TTCTTGACCA ATATATTAAT CAAAAAGAAG GCGATATTGT CGATCTTGAA
GGGAAGGTTT TAGGCAAACA TCAAGGGATT CATCATTATA CCATTGGACA GCGCAAAGGC
TTAGGTGTTG CTGCTCCTGA GCCTTTATAT GTGGTAAAAC TTGATCCGAT CATGAATCAA
GTTATTGTAG CAAATCGGGC TAATGCGGGA CGATCGCATT GTACCGTAAC CCGTTTGAAT
TGGGTATCTA TTGCTGAACC GTCTACTCCA ATACGAGTAG AAACCCAAAT TCGCTATCGT
TCTTCTGCGG TTCCCGTTGA TTTAATCCCT TTAGAAGATA ATCGAGTTAA ATTAGTCTTT
GATGAACCAG AATTTGGCAT TACCCCAGGC CAAGCGGCAG TTTTCTATGA TGGAGAAATC
CTATTAGGAG GGGGAATTAT TGAACTATAA
|
|---|
| Protein sequence | MNKVVVGLSG GVDSSVAAAV LHHQGYEVIG LTLWLMKGKG QCCSEGMVDA AFICEQLGIP
HHIVDSRDVF QANIVNYLVS GYEAGITPLP CSQCNRAVKF GPMLDYARQE LGCDRIATGH
YARIRYDEIS QRYQLLRAID RNKDQSYFLY DLSQEMLAGT VFPLGDQTKE DTRRIAAEFD
LKTASKPESQ DLCLIEAHGS MKTFLDQYIN QKEGDIVDLE GKVLGKHQGI HHYTIGQRKG
LGVAAPEPLY VVKLDPIMNQ VIVANRANAG RSHCTVTRLN WVSIAEPSTP IRVETQIRYR
SSAVPVDLIP LEDNRVKLVF DEPEFGITPG QAAVFYDGEI LLGGGIIEL
|
|---|
| |