| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cyan8802_2478 |
|---|
| Symbol | |
|---|
| ID | 8391803 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cyanothece sp. PCC 8802 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013161 |
|---|
| Strand | - |
|---|
| Start bp | 2499464 |
|---|
| End bp | 2501083 |
|---|
| Gene Length | 1620 bp |
|---|
| Protein Length | 539 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 39% |
|---|
| IMG OID | 644980445 |
|---|
| Product | protein of unknown function DUF1555 |
|---|
| Protein accession | YP_003138182 |
|---|
| Protein GI | 257060294 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | [TIGR02595] PEP-CTERM putative exosortase interaction domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.304731 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGCTTTC CTTTGGTTTC CAACTCTTTC CCTCAGCTTT GTCTTACAAT TATTCCTGTT
ACCGTTATGT TAGTAGGATT TACCGATTCA GCCAATGCTT TAAGTATTAG CCGTCTTGGG
AGTTTTGAAA CAGGACAATC AGCCGGATCA GAAATTTCAG CTTATGATCC AACGAGTCAA
CGATTATTTG TTACTAATGG AGCCAATAAT CGCATCGATA TCTTAAGCAT TACTGATCCT
AGTAATCCTA CTAAATTTGG TGAAATTGAT CTGGCTTCTT TAGGAGGTGG AGTTAATAGT
GTTGCTGTCA AAAATGGACT TGTAGCTGCC GCAGTTCAAG CTAATACCGT TACCGATCCT
GGTACAGTTG CTTTTTTTGA TGTTAGCGGA ACTTTCCTTA ATAGTATAAC CGTGGGAGCG
TTACCTGATA TGTTAACGTT TACCCCTGAT GGGACTAAAC TTTTAGTTGC TAATGAAGGC
GAACCTAATC AAGACTATAG CATTGATCCA GAGGGATCAA TTAGTATTAT TGATTTGTCT
TTGGGAGTCG CTTCTGCAAC AACAACCACA GCCGATTTTA GTGCTTTTAA TAGTAGCAAT
CTTGATCCTA ATGTGCGTAT TTTTGGACCA GGAGCAACTA TACAACAAGA TTTAGAACCC
GAATATATTG CCGTTTCTGG TGATGGTCAA ACCGCTTTTA TTACGCTACA AGAAAACAAT
GCTTTTGCTA TTCTCGATAT TCCTAACGCA ACCATAACGG ATGTTGTTGG CCTGGGGTTT
AAAGACCATA ATTTACCCGG AAATGGTTTA GATGCTAGTG ATAGAGATAC TGGTATTAAC
ATCCAAAATT GGCCGGTTTT TGGGATGTAT CAACCGGATG CAATTAGCTC TTTTCAAGTT
GGTAATCAAA CCTATTATAT CACGGCAAAT GAAGGAGATG CTCGTGATTA TGATACTTTT
TCAGAAGAAG TAAGAGTTAA CGGTGTTACC CTTGATCCAA CCGCTTTTCC GAATAGTTCT
ACCTTACGAC AGAATACTAA TTTAGGTCGT CTTAATATTA CTAATACCCT AGGAGATACC
GATGGAGATG GGGACTTTGA TGCGCTTTAT GCGTTTGGGG CTCGTTCCTT TTCAATTTGG
GATGATCAAG GTAATTTAGT GTTTGATAGT GGGGATGATT TAGAACAAAT TACCGCTTCT
TTATTGCCTT CACTGTTTAA TTCCCAAGGA ACCGTTACTG ATTTTGATAC TCGCAGCGAT
AATAAAGGAC CTGAACCTGA AGGAATAACC GTTGGACAAG TTGGAAATAG TCTCTATAGT
TTTGTGGGAT TAGAACGCAT TGGGGGCTTT ATGGTTTATG ATCTGACTGA CCCAACTAAT
CCCCTATTTG TTCACTATCA AAATGACACT GCCATAGGTG ATATTAGTCC TGAAGGGTTA
TTATTTATCT CGGCTGAAGA TAGTCCTAAT GGTCAATCTT TATTAGTGTT AACTAACGAA
GTTAGCGGTA ATACTGTTAT TTATTCAGTA ACTACCCCTG AACCTGCTTC TATTTTAGGA
TTAATGATGG TTGGTTTGAT AGGAGGTTTA ACTCGTAAAT CTTCCACTAA GCAAAAATAA
|
|---|
| Protein sequence | MRFPLVSNSF PQLCLTIIPV TVMLVGFTDS ANALSISRLG SFETGQSAGS EISAYDPTSQ
RLFVTNGANN RIDILSITDP SNPTKFGEID LASLGGGVNS VAVKNGLVAA AVQANTVTDP
GTVAFFDVSG TFLNSITVGA LPDMLTFTPD GTKLLVANEG EPNQDYSIDP EGSISIIDLS
LGVASATTTT ADFSAFNSSN LDPNVRIFGP GATIQQDLEP EYIAVSGDGQ TAFITLQENN
AFAILDIPNA TITDVVGLGF KDHNLPGNGL DASDRDTGIN IQNWPVFGMY QPDAISSFQV
GNQTYYITAN EGDARDYDTF SEEVRVNGVT LDPTAFPNSS TLRQNTNLGR LNITNTLGDT
DGDGDFDALY AFGARSFSIW DDQGNLVFDS GDDLEQITAS LLPSLFNSQG TVTDFDTRSD
NKGPEPEGIT VGQVGNSLYS FVGLERIGGF MVYDLTDPTN PLFVHYQNDT AIGDISPEGL
LFISAEDSPN GQSLLVLTNE VSGNTVIYSV TTPEPASILG LMMVGLIGGL TRKSSTKQK
|
|---|
| |