Gene Cyan8802_1963 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCyan8802_1963 
Symbol 
ID8391278 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCyanothece sp. PCC 8802 
KingdomBacteria 
Replicon accessionNC_013161 
Strand
Start bp1983911 
End bp1984651 
Gene Length741 bp 
Protein Length246 aa 
Translation table11 
GC content46% 
IMG OID644979943 
Producttwo component transcriptional regulator, winged helix family 
Protein accessionYP_003137689 
Protein GI257059801 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.470012 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTCGAA TACTTGTAAT TGATGATGAT GCTGCCATTT CAGAATTGGT CAGCGTCAAC 
CTAGAAATGG CTGGTTATGA TGTGAATCAA GCTGGAGACG GGATTAAAGG GCAAGCCTTA
GCCGTCCAAT TGCAGCCTGA TTTAATCATG CTAGACCTCA TGTTGCCCAA AGTAGACGGA
TTTACCGTTT GTCAGCGACT GCGCCGAGAT GAACGGACGG CCGATATTCC CGTTCTGATG
TTAACCGCTT TGGGAGAAAC CAAAGATAAA GTCGAAGGCT TTAACGCAGG GGCCGATGAT
TATCTGACCA AACCTTTTGA AGTCGAAGAG ATGTTAGCTA GGGTTCGGGC GTTACTGCGG
CGGACTGATC GGATTCCCCA AGCAGCGAAA CATTCAGAAA TCCTCAACTA TGGTCCTTTG
ACCCTGATTC CAGAGCGATT TGAAGCGATT TGGTTCCAAA AAACGGTTAA ATTAACCCAT
CTAGAATTTG AATTGCTTCA TTGTTTGCTG CAACGTCACG GACAAACGGT CTCTCCTAGC
GAAATTCTCA AAGAAGTGTG GGGATACGAT CCCGATGACG ATATTGAAAC GATTCGGGTA
CATATTCGCC ATTTACGGAC GAAATTAGAA CCCGATCCCA GACATCCCTG TTATATTAAA
ACCGTTTATG GTGCAGGGTA CTGTTTAGAG TTACCAACAG CCGAACAACT GATGGCTGAA
GCCAATGCAG CAGTCGTTTA A
 
Protein sequence
MPRILVIDDD AAISELVSVN LEMAGYDVNQ AGDGIKGQAL AVQLQPDLIM LDLMLPKVDG 
FTVCQRLRRD ERTADIPVLM LTALGETKDK VEGFNAGADD YLTKPFEVEE MLARVRALLR
RTDRIPQAAK HSEILNYGPL TLIPERFEAI WFQKTVKLTH LEFELLHCLL QRHGQTVSPS
EILKEVWGYD PDDDIETIRV HIRHLRTKLE PDPRHPCYIK TVYGAGYCLE LPTAEQLMAE
ANAAVV