| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cyan8802_1947 |
|---|
| Symbol | |
|---|
| ID | 8391262 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cyanothece sp. PCC 8802 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013161 |
|---|
| Strand | - |
|---|
| Start bp | 1967274 |
|---|
| End bp | 1969214 |
|---|
| Gene Length | 1941 bp |
|---|
| Protein Length | 646 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 644979927 |
|---|
| Product | ATP-dependent metalloprotease FtsH |
|---|
| Protein accession | YP_003137673 |
|---|
| Protein GI | 257059785 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0465] ATP-dependent Zn proteases |
|---|
| TIGRFAM ID | [TIGR01241] ATP-dependent metalloprotease FtsH |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCTCCAG ACATTAATCA TTCTAATCAA ACCTCTGAAC CCGGCGGTTT AGGTCGAACC
GTCATTATCT TGCTGTTGTG GTTATTGTTC CTGAACTTGC TCGTGATGCG CAGTGATCAC
GAGGGGATCG TCTCCTATAG CCAATTTATC GACCAAATCG AAGCCGGGAA GGTAGCTAAG
GTCAATATTG GCACAGAACG CATTGAATAT ACCTTAAAAC CCGAAATTAA TAGCAAAGAT
AAAACCCAAA CCTTAATTAC CCTTCCCATT GCCCAAGATA CGACCCTAAC CCAACGGTTA
GAAGCCCATG ATGTGGAGTT TTCAGCTATC CCACCGAGTC AAACGGGATG GATCTCCAAT
TTACTCGGTT GGATTATTCC GCCCTTAATT TTCTTTGGCA TCTGGATGTG GTTGTTAAAC
CGTTCCCAAA TGAATGGACC GGGTATGCTA ACCGTAGGAA AAAGTAACGC GCGTATTTAT
TCCCAAGGAG ATACAGGAGT CACCTTTGAA GACGTAGCGG GAGTGGATGA AGCCAAGACA
GAATTACAAG AAATCGTTGA TTTTTTGAAA AGCGCAGAAA AATATACCCG TTTAGGGGCA
AAAATTCCCA AAGGAGTGTT ATTAATCGGT CCCCCAGGAA CCGGGAAAAC CCTGTTAGCC
AAAGCGATCG CCGGAGAAGC CGGAGTTCCT TTCTTTAGTA TCTCAGGCTC GGAATTTATC
GAATTATTCG TCGGTATTGG GGCTTCACGG GTACGAGATC TCTTCGATCA AGCCAAAACT
CAGGCTCCCT GTATCGTCTT TATTGATGAA TTGGATGCCT TGGGTAAATC TAGAGCCAAT
ATGGGGGGCA TGATTGGAGG CAATGACGAA CGGGAGCAAA CCTTGAACCA ATTATTAGCC
GAAATGGATG GATTTGACCC CAATACGGGG GTAATTTTGC TGGCTGCTAC CAACCGTCCT
GAAGTGCTTG ATCCCGCCTT ATTACGTCCT GGCCGTTTTG ATCGTCAAAT CGTAGTTGAT
CGCCCTGATA AGAGTGGACG GGAAGCCATT TTGCGGGTAC ACGCCCATGA TGTCAGGTTA
GCCCCTGATG TAGATTTAGA CAAGTTAGCG GCCAGAACGC CAGGGTTTGC CGGGGCAGAT
TTAGCCAATT TAATCAACGA AGCTGCTTTA TTAGCTGCGC GCAATAACCG AGAAGCCGTG
ATGATGCAGG ATTTTAACGA GGCAATCGAG CGAGTTTTGA CAGGTTTAGA GAAAAAATCA
CGGGTATTGA ATGAATTAGA GAAGAAAACC GTCGCTTACC ATGAAGTGGG TCACGCCTTG
ATTGGGGCAA TTATGCCAGG AACCAGTAAA ATTGAGAAAA TTTCCATTGT GCCGCGTGGG
GTAGGAGCAT TGGGTTATAC CTTGCAATTG CCCGAAGAAG ACCGCTTTTT GATGTTAGAA
GATGAAATTC GCGGACGCAT TGCCACATTA TTGGGGGGAA GGGCAGCCGA AGAGTTGATG
TTTGGTCGGG TGTCTACGGG AGCCAGTGAT GATATTCAAA AAGCGACGGA TCTTGCCGAA
CGGTTTGTGA CGTTGTATGG CATGAGTGAT AAATTGGGAC CGATCGCCTT TGAAAAGGGA
CAACAGCAAT TTTTAGAGGG TTTTACCAAT CCTCGTCGTC CCGTTAGTCC TAAAGTGGCT
GAAGCGATCG ACAATGAAGT GAAAGAATTA GTCGAAGGAG CCCATCAAAT CGCGTTGAAG
ATTTTAGCAG AAAATCGGGA CTTATTAGAA ATAACGGCTC AAACGCTCTT AGAAGCCGAA
ATTTTAGAAG GAGAAGCTCT AAAAACCCAA CTTAAACAGG TTCGCCAACC ATCAATGATG
GACAATTGGT TATTAACCGG TGAGGTAACT CAGGCTTCAA CCTCCCATTC TATTAGTTCT
AATGGAAGAA TTTGTCTTTA A
|
|---|
| Protein sequence | MSPDINHSNQ TSEPGGLGRT VIILLLWLLF LNLLVMRSDH EGIVSYSQFI DQIEAGKVAK
VNIGTERIEY TLKPEINSKD KTQTLITLPI AQDTTLTQRL EAHDVEFSAI PPSQTGWISN
LLGWIIPPLI FFGIWMWLLN RSQMNGPGML TVGKSNARIY SQGDTGVTFE DVAGVDEAKT
ELQEIVDFLK SAEKYTRLGA KIPKGVLLIG PPGTGKTLLA KAIAGEAGVP FFSISGSEFI
ELFVGIGASR VRDLFDQAKT QAPCIVFIDE LDALGKSRAN MGGMIGGNDE REQTLNQLLA
EMDGFDPNTG VILLAATNRP EVLDPALLRP GRFDRQIVVD RPDKSGREAI LRVHAHDVRL
APDVDLDKLA ARTPGFAGAD LANLINEAAL LAARNNREAV MMQDFNEAIE RVLTGLEKKS
RVLNELEKKT VAYHEVGHAL IGAIMPGTSK IEKISIVPRG VGALGYTLQL PEEDRFLMLE
DEIRGRIATL LGGRAAEELM FGRVSTGASD DIQKATDLAE RFVTLYGMSD KLGPIAFEKG
QQQFLEGFTN PRRPVSPKVA EAIDNEVKEL VEGAHQIALK ILAENRDLLE ITAQTLLEAE
ILEGEALKTQ LKQVRQPSMM DNWLLTGEVT QASTSHSISS NGRICL
|
|---|
| |