| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cyan8802_1930 |
|---|
| Symbol | |
|---|
| ID | 8391245 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cyanothece sp. PCC 8802 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013161 |
|---|
| Strand | + |
|---|
| Start bp | 1953259 |
|---|
| End bp | 1954950 |
|---|
| Gene Length | 1692 bp |
|---|
| Protein Length | 563 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 644979910 |
|---|
| Product | thiamine pyrophosphate protein central region |
|---|
| Protein accession | YP_003137656 |
|---|
| Protein GI | 257059768 |
|---|
| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0028] Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCTAGTA ATCTAATTCC TTGGAGTTCT CGTCCTAGGA CTGGTGCACG AGCGATCGCT
GAACAGTTAG TCAAGGCGGG ACTCATCGGA AGTGATAATT TATTGATGGG AAACCCTGGC
AGTGGAGAAC ATTGGCTGTA CCTAGAACTG ACGGATTACC TCAAAATGGG GTTAGCTGAG
CCGGCGGTGG GTAGTATGCT CGATGGCGCG AGTCGTATCA AGTCTAAACC CGCGATCGCT
ATTGCCCATG GGTTTGTCGG GTTTTCGGGA CTACAAGGCA GTGTCTTTAA TGCGGCTCAA
CGGCAAAGTC CTCTATTAGT GATTGTGGGA ACGGCGGACT CTCACGCCCA TACGGGAGAA
ACCCATATGT ATGCGGACGT AGAAGGCGCA GCCAAGGCAG CACGGGCAAA ATACGTCAAA
AATGCGACTG ATCCGGCGAC GCTGCTGCGA GATTTGCGTG ATGCCATTAT TGAGGCGCAA
ATTCCCCCGT TTGGACCCGT TGTCTTTATT GTTGGGTCGA ATGTCGCCAA TGCCCCCAAT
ACAGAACCCG TTATCGTCCC GAAATTGCCT AACTGTCAAC TCGCGCCCCC CTATAGTGAG
ATCGAAATCT TGGGCGAAGA ACTACTCAAG GCTGAAAAAC CGACTTTGTT GGTGGGGGAT
GGCATAGCCA GAAGTCAAGC ACACCAAGAA CTTTTAGCCG TCGCTGAAGC CTTGGGAGCG
GATGTTTGGG CTTCCATGGA GTCGGAGGTC AATTTTCCTC GCATCCATGC ACTGTATCGG
GGCAATCTCG GCCACATGGA TGATGCCCGT GGTCGAGATT TGCTCAAAGC GGTAGATTGT
GCGGTTGCGG TGGGGACTCC GGTTTATCAA ACCGTGTTTA ATTCTAAATT GCCGTTATTC
TCGCCTAATA CGGTTCTCGC CGCGATTAAT TATGATCCGG AAACTTCCCT GCGAGGCCAC
AATGATATTA CCTTACCCAT TAAGGGCGAT CCTAAACGCA TCTTGGGAAT GTTGCTAACG
GTGATCCAAC AGAAACAAAC GGCGACGCAA AGGGATCAGG CTAAGCAACG TTTGATGTTA
CGAGAACAAG AAAAGTCGGC TTTGATGGCA CAACGGCGTA CAACTCAATT GGCACAACCA
GGGGTAACGA TAGCGAAATT TGGCTATTTC CTTGAACAAA GACTCAAAGA TCTCAGCGAT
CGACCGATTA TTTTCAATGA GGCTTTAGAG GGGGCTGTTG GCTTAACAGA TTATCTCGAA
AATGTCAACA TTCCAGGGAA ATATTTCGAT ACGTCTGGGG GTTCTCTCGG TGAGTGGGGT
GGTGCGGTGG GTGCATCCTT GATTCACGGA CGGACAATTG TTTTTATCGG GGATGGGGGC
TTTCATTATC CACTGCAAGC TCTTTGGAAT GCAGCACAGG AGAAATTGCC GCTTGGTTTA
GTGGTGGTTC ATAATGGAAC TTACGGTCTT TTGTATAGTA ACCTGGATGC GGCGTTAAGA
CAACAAGGAA TTGATCCCGC TTCCATGCCT CATCCCCATT ATTATGATCT GCCCGGGATT
GATTATGTCA AAATTGCTGA GGGTTATGGT ATTCCAGGGA TGAGAGTAGA CCAAGAATCT
CAAATAGAAG TGGCTATTGA CAAAATGTTG CACACCAATA GTCCCTTTTT GATCGATTTA
ATCCTTAATT AA
|
|---|
| Protein sequence | MASNLIPWSS RPRTGARAIA EQLVKAGLIG SDNLLMGNPG SGEHWLYLEL TDYLKMGLAE
PAVGSMLDGA SRIKSKPAIA IAHGFVGFSG LQGSVFNAAQ RQSPLLVIVG TADSHAHTGE
THMYADVEGA AKAARAKYVK NATDPATLLR DLRDAIIEAQ IPPFGPVVFI VGSNVANAPN
TEPVIVPKLP NCQLAPPYSE IEILGEELLK AEKPTLLVGD GIARSQAHQE LLAVAEALGA
DVWASMESEV NFPRIHALYR GNLGHMDDAR GRDLLKAVDC AVAVGTPVYQ TVFNSKLPLF
SPNTVLAAIN YDPETSLRGH NDITLPIKGD PKRILGMLLT VIQQKQTATQ RDQAKQRLML
REQEKSALMA QRRTTQLAQP GVTIAKFGYF LEQRLKDLSD RPIIFNEALE GAVGLTDYLE
NVNIPGKYFD TSGGSLGEWG GAVGASLIHG RTIVFIGDGG FHYPLQALWN AAQEKLPLGL
VVVHNGTYGL LYSNLDAALR QQGIDPASMP HPHYYDLPGI DYVKIAEGYG IPGMRVDQES
QIEVAIDKML HTNSPFLIDL ILN
|
|---|
| |