| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cyan8802_1863 |
|---|
| Symbol | |
|---|
| ID | 8391178 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cyanothece sp. PCC 8802 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013161 |
|---|
| Strand | + |
|---|
| Start bp | 1896938 |
|---|
| End bp | 1897972 |
|---|
| Gene Length | 1035 bp |
|---|
| Protein Length | 344 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 42% |
|---|
| IMG OID | 644979849 |
|---|
| Product | Tetratricopeptide TPR_2 repeat protein |
|---|
| Protein accession | YP_003137595 |
|---|
| Protein GI | 257059707 |
|---|
| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG3063] Tfp pilus assembly protein PilF |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCTAATT TTACCCCTAA AATCAAACGA GTCACGAAAC CGACTGACAA AAGCGGATTA
GCAAGGATGG CTTTGCAACT CGTCCAAGAA AACCGCTATG ATGAAGCTTT GTTAGCTTTT
CAAGAAATTC TTGAACAAGA TCCCAATACC AAACAAGCTC ATCTAGGAAT TGGCAGGATC
TATTTGAAGC AAAAAGATTA CCAAGGAGCC TTGACTCACT TCCAAACCGC CAGAAACCTA
GATCCGATGA TGGTTCAAGC GTCTTTAGCC ATTGGCAATG CTTATTACGA GCTAAAGCAA
CTAGAATTAT CAATGCAAGC TTTTCAAGAC GCAGTCAATA TTGATCCTAG CGATGCAACG
GGGTATTTGG GGATTGGTCG AGTTCTCATC AAGCAAAAGC AATATCCTCA AGCCAAGGAG
CAATTGCAAA AAGCTCTAGT CCTCAATCCG CAGTTGATAC TAGCCCGTCT GCTCATGGCT
CAGATTTATC AGGAACAGGG GGATATAGAT CAAGCTATTA CTGAAATAGA ATCAGTCCTC
AAGCTCAATC CCACCCTCTC CAATGCCTAT CAAGGGTTAG GAAATCTCTA CCTGAAACAA
GAAAAATATG CCCTAGCTCG GAAAAACTTT GAACAAGCTC AGCAATTAAA TCCCAAGATT
CCAGCAGCAG CTAAACTGCC TTATCTAGAA GTTTTAGTCC AAGATAACGC CCTCGATGAA
GCAACAGCTA TTCTAAAGGA AATGCCCAAC CAAAAACCCC TCGAAGTGAG AAAACAAAAA
CTATGGGGAG ATATTTATGT CCGTCAAGGC TTCCTCGAAG AAGCCCTACA ATCTTACCGA
TCAGCTGCTT TACTGGCAGC AGAAGAGGGA GAGATAAGAA ATGAGCTTTC GGATTTAGAT
CCGTTACTAC AGAAAGCCCA AACTGACTTA AAAGCCTTAG TAGAAATCTA CAAAGCCAAA
GCAATTGAGC GAATTTCAAC AATGAAACTC CCGGAGAATG CGACGGACAG GACAGCATTA
GATTCTTTAT TCTAG
|
|---|
| Protein sequence | MSNFTPKIKR VTKPTDKSGL ARMALQLVQE NRYDEALLAF QEILEQDPNT KQAHLGIGRI
YLKQKDYQGA LTHFQTARNL DPMMVQASLA IGNAYYELKQ LELSMQAFQD AVNIDPSDAT
GYLGIGRVLI KQKQYPQAKE QLQKALVLNP QLILARLLMA QIYQEQGDID QAITEIESVL
KLNPTLSNAY QGLGNLYLKQ EKYALARKNF EQAQQLNPKI PAAAKLPYLE VLVQDNALDE
ATAILKEMPN QKPLEVRKQK LWGDIYVRQG FLEEALQSYR SAALLAAEEG EIRNELSDLD
PLLQKAQTDL KALVEIYKAK AIERISTMKL PENATDRTAL DSLF
|
|---|
| |