Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cyan8802_1838 |
Symbol | |
ID | 8391153 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cyanothece sp. PCC 8802 |
Kingdom | Bacteria |
Replicon accession | NC_013161 |
Strand | - |
Start bp | 1867645 |
End bp | 1868340 |
Gene Length | 696 bp |
Protein Length | 231 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 644979826 |
Product | two component transcriptional regulator, LuxR family |
Protein accession | YP_003137572 |
Protein GI | 257059684 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTCAAATC CTGAGAAAAT TTTACTGGTT GATGATGAAC CAGGGGTTCG TGAATCTGTC CAAGCTTATC TAGAATATAG TGGTGATTTT AACGTTAAAG TTGCCAGCAA TGCTAATCAA GCTTGGGAAC TCATTGAAAA AGAAATCCCT GATTTAATCA TTTCTGATAT TATGATGCCT CAAGTTGATG GCTATCAATT TTTAGGAAAA TTACGGGAAG ACCCTCGCTA TCAGTCCCTT CCTGTGGTTT TTTTAACCGC TAGGGGGATG ACTTCTGACC GTATTCAAGG CTATCATGCT GGATGTGATG CTTATTTATC CAAACCCTTT GATCCTGAAG AATTAGAAGC GATCGTTAAA AATTTACTCG AACGACGTAA AGTTAGTATA AAAGCCAGTA GTGAGTCCGT CAAATTAGAA GAAATTGCCC AAGAAATCCG CGAAATTAAA GCACAAATTG GACAACAACC TCACTTAGTA ACCACTCCTT CTCCCATCAA AATTGAATTA ACTCCCAGAG AACAAAGTGT TTTAGATTTA GTGGCAGAAG GATTGATGAA TAAAGAAATT GCCTCGCGTT TAAATACCAG TGTTCGCAAT GTTGAAAAAT ACGTCAGTCG TTTGTTTAGT AAAACCGGAA CCAATAGTCG CACCGAATTA GTTCGCTTTG CCCTTAAACA TGGTCTAACT CAATAG
|
Protein sequence | MSNPEKILLV DDEPGVRESV QAYLEYSGDF NVKVASNANQ AWELIEKEIP DLIISDIMMP QVDGYQFLGK LREDPRYQSL PVVFLTARGM TSDRIQGYHA GCDAYLSKPF DPEELEAIVK NLLERRKVSI KASSESVKLE EIAQEIREIK AQIGQQPHLV TTPSPIKIEL TPREQSVLDL VAEGLMNKEI ASRLNTSVRN VEKYVSRLFS KTGTNSRTEL VRFALKHGLT Q
|
| |