Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cyan8802_1763 |
Symbol | rplA |
ID | 8391075 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cyanothece sp. PCC 8802 |
Kingdom | Bacteria |
Replicon accession | NC_013161 |
Strand | - |
Start bp | 1798957 |
End bp | 1799673 |
Gene Length | 717 bp |
Protein Length | 238 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 644979750 |
Product | 50S ribosomal protein L1 |
Protein accession | YP_003137499 |
Protein GI | 257059611 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0081] Ribosomal protein L1 |
TIGRFAM ID | [TIGR01169] ribosomal protein L1, bacterial/chloroplast |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.00323247 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCCAAAA AACTGTCAAA ACGCTTCAAA GAAGCCCTGG CAAAAGTCGA TCAAAACCAA ACCTATGCAC CGTTAGAAGC CCTGCAACTG CTCAAAGAAA CGGCAACGGC AAAATTTAAT GAATCGGCTG AAGCCCACAT TCGTTTAGGA ATTGATCCTA AATACACCGA CCAACAATTA CGGACTACCG TCTCCTTACC CAAAGGAACC GGCCAAGAAG TGCGCGTCGC CGTCATTGCC AGAGGGGAAA AAGTCCAAGA AGCCAACAAT GCCGGAGCCG ATATTGTGGG GTCTGAGGAA TTAATCGAAG AAATTTTCAA GGGAATGATG GATTTCGAGG TACTCATTGC CACCCCCGAC ATGATGCCCA AGGTAGCGAA ATTAGGGCGG TTGTTGGGAC CTCGCGGCTT GATGCCTTCT CCCAAGGGGG GAACGGTAAC GGCGGATCTC ACCAATGCGA TCGCCGAATT TAAAGCCGGA AAATTAGAAT TTCGGGCTGA CAGAACAGGG ATTGTTCATG TTATGTTTGG TAAGGCATCG TTTACCCCCG AAGACTTATT GGCCAATCTC AAGGCTCTTC AAGAAACCGT AGACCGTAAC CGTCCTTCTG GTGCCAAGGG GCGTTACTGG CGCAGTGTGT TTGTTTCTGC TTCGATGGGA CCCTCTATCG CGGTGGATAT CAACGCCCTA CGGGATCTAA AATTGACAGA GGTTTGA
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Protein sequence | MPKKLSKRFK EALAKVDQNQ TYAPLEALQL LKETATAKFN ESAEAHIRLG IDPKYTDQQL RTTVSLPKGT GQEVRVAVIA RGEKVQEANN AGADIVGSEE LIEEIFKGMM DFEVLIATPD MMPKVAKLGR LLGPRGLMPS PKGGTVTADL TNAIAEFKAG KLEFRADRTG IVHVMFGKAS FTPEDLLANL KALQETVDRN RPSGAKGRYW RSVFVSASMG PSIAVDINAL RDLKLTEV
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