Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cyan8802_1646 |
Symbol | |
ID | 8390958 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cyanothece sp. PCC 8802 |
Kingdom | Bacteria |
Replicon accession | NC_013161 |
Strand | - |
Start bp | 1685329 |
End bp | 1686033 |
Gene Length | 705 bp |
Protein Length | 234 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 644979637 |
Product | ribulose-phosphate 3-epimerase |
Protein accession | YP_003137386 |
Protein GI | 257059498 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0036] Pentose-5-phosphate-3-epimerase |
TIGRFAM ID | [TIGR01163] ribulose-phosphate 3-epimerase |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCCAAT CTACTAAACC CATTGTTATC GCCCCTTCCA TCCTTTCTGC TGATTTCAGT CGTTTAGGCG AAGAAATTCA AGCTGTAGAC AAAGCTGGAG CCGACTGGAT TCATGTTGAT GTTATGGATG GTCGCTTCGT TCCCAACATC ACCATTGGTC CATTAATCGT CAGTGCCATT CGTCCCTATA CCCAAAAGCC CTTAGACGTA CACTTAATGA TCGTCGAACC CGAAAAGTAC GTCGCTGATT TTGCCAAAGC GGGTGCGGAT ATTATTTCCG TCCATGCAGA ACATAACGCT TCTCCCCACC TCCATCGTAC CTTGGGACAA ATTAAAGAAC TGGGTAAACA AGCCGGGGTT GTTCTCAATC CTTCTACCCC CCTAGAGTTG ATTGAGTATG TCTTGGAACT TTGCGATCTA GTACTCATTA TGAGTGTTAA CCCCGGTTTT GGTGGACAAA GCTTTATTCC GGCGGTGGTG AGCAAAATCC GCAAGCTACG TCAGATGTGT GATGAGCGCG GGCTTGATCC TTGGATTGAA GTAGACGGCG GGCTAAAAGG CGGTAATACT TGGCAAGTCT TAGAAGCGGG TGCTAATGCG ATTGTTGCCG GATCTGCCGT GTTTAATGCC CCGAATTATG CTGAAGCGAT CGAAGGGATT CGCAACAGTA AGCGTCCTGC TGAGCGTGAA TTAGCAACTG TTTAA
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Protein sequence | MSQSTKPIVI APSILSADFS RLGEEIQAVD KAGADWIHVD VMDGRFVPNI TIGPLIVSAI RPYTQKPLDV HLMIVEPEKY VADFAKAGAD IISVHAEHNA SPHLHRTLGQ IKELGKQAGV VLNPSTPLEL IEYVLELCDL VLIMSVNPGF GGQSFIPAVV SKIRKLRQMC DERGLDPWIE VDGGLKGGNT WQVLEAGANA IVAGSAVFNA PNYAEAIEGI RNSKRPAERE LATV
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