| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cyan8802_1323 |
|---|
| Symbol | |
|---|
| ID | 8390635 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cyanothece sp. PCC 8802 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013161 |
|---|
| Strand | + |
|---|
| Start bp | 1344580 |
|---|
| End bp | 1345299 |
|---|
| Gene Length | 720 bp |
|---|
| Protein Length | 239 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 644979331 |
|---|
| Product | protein of unknown function DUF558 |
|---|
| Protein accession | YP_003137081 |
|---|
| Protein GI | 257059193 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG1385] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | [TIGR00046] RNA methyltransferase, RsmE family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 0.107771 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGTATCGCT TAGTTATTGA ATCCATCCAA ACTCTCGATC AAAGCGTCAG TTTAACCCCC
GAACAACAAC ATTATTTAAA ACGGGTTTTG CGCTTAAAAA ACGGCGATCG CTTTGTCGCT
ATGGACGGAC AAGGCAAGTC ATACTTAGCA CAATTAGAAG AAGATTCGGC GAAAATTTTA
CAAAATTTAA AAGAATGCAC CGAGTTACCC CTGGCGATCA CCTTGATGGT AGCCTTACCG
AAAGGGAATG GCTTTGAGGA AATAGTCCGT TGTTGCACAG AATTAGGGAT AACAACCCTA
ATACCCATCA TCAGTCAGCG AACATTACTG AAACCCAGTC CCCATAAACT TGAACGATGG
CGAAAAATTG CCACTGAAGC AGGAGAACAG TCGGAACGTC AACTCATTCC GACTATTGTT
GACCCCATTG TTTTTAACGA AGCCTTAAGA AATATAGACA AAATCCCTAG CGATCGCTAT
ATTTGTGTTA CTCGTAAAAA AGCCCATCAT TTACTGACTC ACTTGTCCGA GACTTCCCAA
AATCCTCTAG TGATTGCGAC GGGATGCGAA GGAGGATGGA CTCCTGAAGA AATAGAAACA
GCGATCGCGT TTGGGTTTCA ACCCGTCACC CTCGGTCCTC GTATTCTTAG GGCTGTGACT
GCTCCCATTG TTGCCCTATC CCTAGCCGTT TCTGTCATTG AACGCGATAC AATCCCCTAG
|
|---|
| Protein sequence | MYRLVIESIQ TLDQSVSLTP EQQHYLKRVL RLKNGDRFVA MDGQGKSYLA QLEEDSAKIL
QNLKECTELP LAITLMVALP KGNGFEEIVR CCTELGITTL IPIISQRTLL KPSPHKLERW
RKIATEAGEQ SERQLIPTIV DPIVFNEALR NIDKIPSDRY ICVTRKKAHH LLTHLSETSQ
NPLVIATGCE GGWTPEEIET AIAFGFQPVT LGPRILRAVT APIVALSLAV SVIERDTIP
|
|---|
| |