| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cyan8802_1132 |
|---|
| Symbol | |
|---|
| ID | 8390443 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cyanothece sp. PCC 8802 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013161 |
|---|
| Strand | + |
|---|
| Start bp | 1162502 |
|---|
| End bp | 1162975 |
|---|
| Gene Length | 474 bp |
|---|
| Protein Length | 157 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 41% |
|---|
| IMG OID | 644979146 |
|---|
| Product | chromosome segregation and condensation protein, ScpB |
|---|
| Protein accession | YP_003136897 |
|---|
| Protein GI | 257059009 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1386] Predicted transcriptional regulator containing the HTH domain |
|---|
| TIGRFAM ID | [TIGR00281] segregation and condensation protein B |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 3 |
|---|
| Plasmid unclonability p-value | 0.000469648 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGATTAG CAACGACAAT TGAAGCCATT CTGTATTTAA AAGGACAACC TCTATCGTTA
ACAGAAATTG CCCAATGGGC TCATTGTGAA GTCGATGAAG TCCAAGAAGG ATTAATTGAA
CTGATGTCTG ACTATGCTTA TCGAGATAGT GCCCTAGAAG TGGTAGAAAC CCCCCAAGGT
TATAGTTTAC AATTGCGGTC GTCTTTTGAG CATCTCATGG ATAATTTAAT CCCCCCAGAA
TTAGGAACAG GAAACTTGAG AACCCTAGCA GCGATCGCCC TCAAAAATCC CATTCTACAA
ACAGATTTAA TCGAATTACG GGGCAGTACT GCCTATCAAC AGGTTCAGGA ATTGGTAGAC
TTAGGATTTG TCCGTAAACG TCGTCAAGAA AATGGGCGAT CCTATTGGTT AGAGGTCACT
GATAAATTTC ACCAATATTT TGAGATCGAT CAACTCCCTG AAGTCACTCC CTAA
|
|---|
| Protein sequence | MRLATTIEAI LYLKGQPLSL TEIAQWAHCE VDEVQEGLIE LMSDYAYRDS ALEVVETPQG
YSLQLRSSFE HLMDNLIPPE LGTGNLRTLA AIALKNPILQ TDLIELRGST AYQQVQELVD
LGFVRKRRQE NGRSYWLEVT DKFHQYFEID QLPEVTP
|
|---|
| |