| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cyan8802_0342 |
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| Symbol | |
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| ID | 8389646 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cyanothece sp. PCC 8802 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013161 |
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| Strand | + |
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| Start bp | 333000 |
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| End bp | 333653 |
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| Gene Length | 654 bp |
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| Protein Length | 217 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 644978380 |
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| Product | RNA polymerase sigma factor RpoE |
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| Protein accession | YP_003136138 |
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| Protein GI | 257058250 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTCAAG CAATTCCTGC ATCCTGGTCA ACGGCACAAG CCAAAGAATC AGCTGCTAAA
GTGCCTCCAG AGAAACTCTC AAACTACGAT TTGATTTTGC GCTGTCAAGA GGGATTTCAT
CCCGATCGCG GGGCTTTCTC TGAACTTTTA AATCGCTATC AGTCCCATGT TGATAGGATT
CTCTATCATC TGGCTCCAGA TTGGCAAGAT CGCGCGGATC TAGCCCAAGA AGTCTGGATT
CGAGTTTATC GGAACATCAA GCGTCTCAAC GAACCCGTAA AATTTCGCGG TTGGTTAAGT
CGCATTGCCA CTAACTTGTT CTACGATGAA CTGCGTAAAC GCAAGCGCGT CAGTCATCCG
GTTTCTCTCG ATGCCCCCCG GCGCGTTGAT GACGGGGAAA TTGAATGGGA TATTGTCTCC
GATTATCCCA GTCCCGACGA CAACTTAGCC ACGCGGGAAT TTTATGACCG CTTACAGGTA
GCGATCGCTG ATTTACCCGA AGCTTTCCGC ATGACCATCG TTCTACGGGA AATCGAAGGC
ATGGCCTACG AAGAAATCGC CCAACTGACG GGAGTTTCTT TAGGAACTGT TAAATCTCGG
ATTGCTCGAG CTAGAGCTAA ATTACAATCA GTGCTACAAC AATATCTAGA TTAA
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| Protein sequence | MSQAIPASWS TAQAKESAAK VPPEKLSNYD LILRCQEGFH PDRGAFSELL NRYQSHVDRI
LYHLAPDWQD RADLAQEVWI RVYRNIKRLN EPVKFRGWLS RIATNLFYDE LRKRKRVSHP
VSLDAPRRVD DGEIEWDIVS DYPSPDDNLA TREFYDRLQV AIADLPEAFR MTIVLREIEG
MAYEEIAQLT GVSLGTVKSR IARARAKLQS VLQQYLD
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