Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cyan8802_0323 |
Symbol | |
ID | 8389627 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cyanothece sp. PCC 8802 |
Kingdom | Bacteria |
Replicon accession | NC_013161 |
Strand | - |
Start bp | 309550 |
End bp | 311115 |
Gene Length | 1566 bp |
Protein Length | 521 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | 644978361 |
Product | glycoside hydrolase family 10 |
Protein accession | YP_003136119 |
Protein GI | 257058231 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG3693] Beta-1,4-xylanase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGATACAAC GTCGTCGCTT TTTAGAATTT ACAGCAGGAT TAACTCTTTT TCCTCTGATT TCTCAACCCT CTAATTCTGA AACTGTCAAA AATGCTTCCC AAGAAACAGT TACTTTACAA GGATGGGATT TTCAAGGGAT ACCTTTAGAT CAGTCTGGAT GGGAAACGCT GCATTTTTTG GATTTAGAAG AAAACCCGAT TTTTAATCCT CCTCGTCAGG TAGAAAGCGG AAAATTGATC TCTTCTTTTC CTCCCTTTCC TGTCATGATT GCCATTAACT TATTAGTGTC TGGTTTTGGC AAAGTTTATC TTTATGCTGA TAACCAAGGA AAAGGCTATA CTATTGCTGA TTTCCCTCTT AATCTTAACC TAGAATTGAC TCGGACTCGT TGCGATCGCG TTCAGTCTTT AATTAATACC TGGAAACAGC AAGGTTATAC TTCTCCTGCA ACAGTAATTA ATCGTCTGAA TCAAGCTTTT TTTTATCTTC AAAAAGCAGA AAATAGCTCA TCAATCACCG AACAAATCCA ATGGTGTCAA CAGAGTTTGG TTGAGAGTTT ATGGACTGGA GAAGAAGCGG TTTTAGCCCA TGCAAAATAT CAAATTTCTC GGCAAGAAAA ACGTCCTGAT TTTTTGTTTG GCTGTGGTTT TCCCTATGGA GGAGAAACGG ATAAAGCTTA TTTTAAAGAG GTTTTTAATT TTACAACCCT TCCCCTATAT TGGCGAGATT TAGAAAAAAA ACAAGGTCAA AAAAATTATG AACCCCTCAA TCAAATGCTT GATTGGTTAG AAGAAAATAA GATTACCCCA AAAGGCCATC CCTTAGCTTG GTTTGCTGAA TTTGGCATTC CTGAATGGTT AAAAGATACG AGTTTTAAGA CGATGAAAAG AGAACTTGAT TTACATATTC AAGAAGTGAC TCGATATTTT GGTCAACGAT TTCCCTATTA TGATATTATT AATGAAGCTA GTGGTCGGGC TTTTGCCAAT CAACCGGGTT ATTCTTCAGA AGAATTAGTG GAACTTTCAG GGGTTACTGC TACTGCTTGT CATCAAGGTA ATCCCCAAGC TTTTCGTATT ATTAATGATT GTTGTTTGTG GGCTAGACAT CGTGCTTTAG AACAACCAAC TCCTTTGACC CCTTATCAAT ATATAAAAGC TTGTTTAGCT GCTAATATTC CCTTTGAAGC TATTGGATTA CAGCTTTATT ATCCTGACCG GGATTTGTTT GAAATTAATC GCTTAATAGA ACGGTTTGGA CAATTAGGAA AAATTATTCA TATTACCGAA TTAGGAGTAC CCTCTGACAC CACAGAAGAT GAAAATTCTT GGATGAAAAC GCCCTTTGGT TTATGGCATA ATCCTTGGTC AGAAACGATT CAAGCGGATT GGATTGAACA GTTTTATACC CTATGTTATA GTAAACCGTA CATTAAGGCC ATTACTTGGT GGGAATTATC CGATAAAGGC TATCATTTTT GGGCTCATGG GGGACTCCTT AGACCCGATG GACAACCCAA AGAAGCTTTC TATCGTTTAA AAAGCTTAGT TCAACAATGG AGATAG
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Protein sequence | MIQRRRFLEF TAGLTLFPLI SQPSNSETVK NASQETVTLQ GWDFQGIPLD QSGWETLHFL DLEENPIFNP PRQVESGKLI SSFPPFPVMI AINLLVSGFG KVYLYADNQG KGYTIADFPL NLNLELTRTR CDRVQSLINT WKQQGYTSPA TVINRLNQAF FYLQKAENSS SITEQIQWCQ QSLVESLWTG EEAVLAHAKY QISRQEKRPD FLFGCGFPYG GETDKAYFKE VFNFTTLPLY WRDLEKKQGQ KNYEPLNQML DWLEENKITP KGHPLAWFAE FGIPEWLKDT SFKTMKRELD LHIQEVTRYF GQRFPYYDII NEASGRAFAN QPGYSSEELV ELSGVTATAC HQGNPQAFRI INDCCLWARH RALEQPTPLT PYQYIKACLA ANIPFEAIGL QLYYPDRDLF EINRLIERFG QLGKIIHITE LGVPSDTTED ENSWMKTPFG LWHNPWSETI QADWIEQFYT LCYSKPYIKA ITWWELSDKG YHFWAHGGLL RPDGQPKEAF YRLKSLVQQW R
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