Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cyan8802_0235 |
Symbol | rplF |
ID | 8389539 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cyanothece sp. PCC 8802 |
Kingdom | Bacteria |
Replicon accession | NC_013161 |
Strand | - |
Start bp | 225190 |
End bp | 225729 |
Gene Length | 540 bp |
Protein Length | 179 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 644978281 |
Product | 50S ribosomal protein L6 |
Protein accession | YP_003136039 |
Protein GI | 257058151 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0097] Ribosomal protein L6P/L9E |
TIGRFAM ID | [TIGR03654] ribosomal protein L6, bacterial type |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.89178 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCTCGTA TTGGTAAACG CCCGATTCCT ATCCCCAACA AAGTCACCAT CGACATCCAA GGACAGCACG TCGCCGTTAA AGGACCTAAA GGATCCTTAG AGCGTACGTT GCCCGATAAA GTCAACGTCG TCCAAGAAAA TGACACCCTG CTGGTACAAC GCGAAGACGA TTCCCGTACC GCCCGTGAAC GTCATGGACT GACCCGTACC CTGGTGGCCA ACATGGTTGA AGGAGTCTCC AAAGGCTTTG AAAAACGCTT AAGCATCCAA GGGGTGGGCT ATCGTGCTCA AGTTCAAGGG ACTAAACTCA CCCTCAACGT GGGCTACAGT AAACCCGTTG AAATGACCAT GCCCGCCGGG ATTCAGGTGG CTGTGGAAAA TAACACCCTC GTCATTGTGA GCGGCATCGA TAAAGAAATT GTTGGCAACG TCTCCGCCGA AATTCGTGCC GTCCGTCCCC CAGAAGTCTA TAAAGGCAAA GGGATTCGTT ACAGTGATGA ATTTGTTAGA CGTAAAGCTG GTAAGACCGG TAAGAAATAA
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Protein sequence | MSRIGKRPIP IPNKVTIDIQ GQHVAVKGPK GSLERTLPDK VNVVQENDTL LVQREDDSRT ARERHGLTRT LVANMVEGVS KGFEKRLSIQ GVGYRAQVQG TKLTLNVGYS KPVEMTMPAG IQVAVENNTL VIVSGIDKEI VGNVSAEIRA VRPPEVYKGK GIRYSDEFVR RKAGKTGKK
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