| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cyan8802_0160 |
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| Symbol | |
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| ID | 8389463 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cyanothece sp. PCC 8802 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013161 |
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| Strand | - |
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| Start bp | 163709 |
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| End bp | 164836 |
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| Gene Length | 1128 bp |
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| Protein Length | 375 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 644978206 |
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| Product | RNA polymerase, sigma 70 subunit, RpoD subfamily |
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| Protein accession | YP_003135965 |
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| Protein GI | 257058077 |
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| COG category | [K] Transcription |
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| COG ID | [COG0568] DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family
[TIGR02997] RNA polymerase sigma factor, cyanobacterial RpoD-like family |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.303814 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.0300558 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACACAA CTAAAATGAT GCCAGACTAT TCCATAGCCT CTGAATTTAA TCCAGACACT
TTTGAAACTG GAGATCTCGA ACAAGTAGAA GCTGATTTTG AGGCAGTTGA AGTTGAATTT
TCTGAACTTT CCGATGATTT AGGCCATCAA TATCCCCCTG GATACCGCAA AACGGTTTCT
GATGATACAG TCGGGGCATT TTTCAAAGAA ATGTCGCGTT ATCCTTTGCT AGAAGCGCAA
GAAGAGATTG AACTAGCCTA TAGTGTCCAA TTTTTAGTAG AAGCAGAACA AAAACGCCAA
CAACTCTTAG AAGAACTTCA ACACCCCCCA ACTAAGGCGC AATGGGCACA AGCTATGGGA
TTTGACAGTC AACGTCAGTT TGAAAACCGC CTTTATCGGG GACGGACTGC CAAAAGAAAG
ATGATTCGTT CAAATTTAAG GTTAGTTGTC TCGATCGCTA AACGGTATCT CAACCGGGGT
GTTCCTTTTC TGGATCTGAT TCAAGAAGGG GCGATCGGCT TAAATCGGGC AGCAGAAAAA
TTTGACCCCA ACAAAGGCTA TAAGTTTTCA ACCTATGCTT ATTGGTGGAT TCGTCAAGCG
ATTACCCGTA CCATTGCTAA TGATGCGCGT ACCATTCGTT TACCGATTCA TATTGTTGAA
AAACTCAATA AACTCAAAAA AGCACAACGA ATCCTTAAGC AAAAATTGCA ACGGAATCCT
AACGAAAAAG AACTCGCCCA AGAGTTAGAA ATGACTCCTC CCCAACTGCG TCAGTTATTA
CAATTACGCC GACAATCTTT ATCTTTAAAT CATCGAGTAG GGAAGGGAGA AGATACAGAA
TTAGTGGACT TACTCGAAGA TCAAGATTTA CAACTTCCCG AAGAACAAAT GAACGAGGGA
ATGTTACGCA ATGAAATTTC AGCCGTGTTA AGTGATGTCC TCACCGAACG GGAAAAAGAT
GTTATTTCCC TGCGCTATGG ATTATCCACC AGTCAACCCC ATACCTTAGA AGAAGTCGGA
GGAATGTTTA ACTTATCCCG CGAACGGGTG CGACAAATTC AGAGTAAAGC CATGCGTAAA
TTACGCCGCC CTCAAGTTGC TCGTCGTCTT AAAGGGTGGT TAAGTTAG
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| Protein sequence | MNTTKMMPDY SIASEFNPDT FETGDLEQVE ADFEAVEVEF SELSDDLGHQ YPPGYRKTVS
DDTVGAFFKE MSRYPLLEAQ EEIELAYSVQ FLVEAEQKRQ QLLEELQHPP TKAQWAQAMG
FDSQRQFENR LYRGRTAKRK MIRSNLRLVV SIAKRYLNRG VPFLDLIQEG AIGLNRAAEK
FDPNKGYKFS TYAYWWIRQA ITRTIANDAR TIRLPIHIVE KLNKLKKAQR ILKQKLQRNP
NEKELAQELE MTPPQLRQLL QLRRQSLSLN HRVGKGEDTE LVDLLEDQDL QLPEEQMNEG
MLRNEISAVL SDVLTEREKD VISLRYGLST SQPHTLEEVG GMFNLSRERV RQIQSKAMRK
LRRPQVARRL KGWLS
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