| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cyan7425_5154 |
|---|
| Symbol | |
|---|
| ID | 7291108 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cyanothece sp. PCC 7425 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011884 |
|---|
| Strand | - |
|---|
| Start bp | 5249296 |
|---|
| End bp | 5250033 |
|---|
| Gene Length | 738 bp |
|---|
| Protein Length | 245 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 643588111 |
|---|
| Product | ABC transporter related |
|---|
| Protein accession | YP_002485808 |
|---|
| Protein GI | 220910497 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG1136] ABC-type antimicrobial peptide transport system, ATPase component |
|---|
| TIGRFAM ID | [TIGR02982] ABC exporter ATP-binding subunit, DevA family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGTCAATC CCCCGGTGAT CCAGCCCCAG CCAGCCCCAA CCCAGCCCCA GCGAGATAAA
GCCATTGTGG CTGCGGGGGT CGAGATGGTT TACCAATCGG GTAGCCAGTC CTTCCGGGCC
CTCAAAGGCG TGGATCTGCA TGTCCAGACG GGCGATATTG AGTTGCTCAT GGGGCCCTCA
GGTTCAGGTA AAACCACACT GCTCTCGATT CTGGCGGGCA TTCTCACCCC GACTGGTGGC
TCTGTTCAAC TCCTGAACCA GGAAATTACC CGCCTCTCTC GCCCCAAACT GGCCCGCTTT
CGTCTGGAAC ATATTGGGTT TATTTTTCAG GGCTTTAATC TCTTCCCCGC CCTCACTGCT
GCTGAAAATG TCGAAACGGC CCTCAACCTC AAGGGGATTC GGGGTGGAGC GGCCCGGCGG
GAGGCCCTCA AGTTGCTGGA ACAGGTGGGA CTGGGGGATA AGGGAGAAAA TTTGCCCCGG
GATCTATCGG GTGGTCAAAA ACAACGGGTC GCGATCGCTC GGGCCCTGGC TGGTCGGCCC
AAACTGATTC TGGCGGATGA ACCCACAGCG GCGCTGGACT CGAACAGTGG GCGGGCGGTG
AGTGATCTGC TCCGCAACCT GGCCAAGGAA GAGCATTGTA CGGTGGTGAT GGTCACCCAC
GACCCTCGCA TTATCGATAT TGCCGATGAG GTGGTCTATG TTGAGGATGG TCTGATCTCT
ACCCGGCCCT CCCACTAA
|
|---|
| Protein sequence | MVNPPVIQPQ PAPTQPQRDK AIVAAGVEMV YQSGSQSFRA LKGVDLHVQT GDIELLMGPS
GSGKTTLLSI LAGILTPTGG SVQLLNQEIT RLSRPKLARF RLEHIGFIFQ GFNLFPALTA
AENVETALNL KGIRGGAARR EALKLLEQVG LGDKGENLPR DLSGGQKQRV AIARALAGRP
KLILADEPTA ALDSNSGRAV SDLLRNLAKE EHCTVVMVTH DPRIIDIADE VVYVEDGLIS
TRPSH
|
|---|
| |