Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cyan7425_4938 |
Symbol | |
ID | 7290891 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cyanothece sp. PCC 7425 |
Kingdom | Bacteria |
Replicon accession | NC_011884 |
Strand | - |
Start bp | 5021572 |
End bp | 5023824 |
Gene Length | 2253 bp |
Protein Length | 750 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 643587900 |
Product | capsular exopolysaccharide family |
Protein accession | YP_002485598 |
Protein GI | 220910287 |
COG category | [D] Cell cycle control, cell division, chromosome partitioning [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0489] ATPases involved in chromosome partitioning [COG3206] Uncharacterized protein involved in exopolysaccharide biosynthesis |
TIGRFAM ID | [TIGR01007] capsular exopolysaccharide family |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 0.831467 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGTGCAAT TTAACGCGGA GCGATGGCTG CAAAACCAGC AGCTGCTAAA TGAGTTGTAT TTTTCAGCTA GCGACAAGGT TGAACTTTTA CGTACGCTGA AAAAACGCTG GATCCCGGCC CTTGCCACCG CCGTTACCGT ATTTGCCGGA TGCTATATTT ACTCGGCCTT GCAAACGCCA CTATACCGAT CAGAAGCCCT GATCCTAACT GGTAAAGAAC AAAGTACACC TTTAGGCGAG GAAATCAATA GTACATCTTC TTACTCAAAT TGGTCAAATC CTCTGATCAA TGAAATTCAG GTGCTGCAAA GTAGTTCGCT GGTCACGAAA GCTCAGCAAC AGCTCAAGCC GCCCCATAAC AAAACTTCCG TAGGCTCAAT CGCTGGCGGT TTATCCATTA CCCAGGTAGG GGATTCGGAT GTATTGAAAG TCACTTATAC GGGGACAGAC CCCAAAACCG TCCAAGCCAT TCTGGATGCT CTCAATAAAA CTTATATTGA CTACAGCCTG GAAAAGCGTC GTTCTCAGGT CAGCAGTGGT GTGCGGTTTA TTGAAGAGCA ACTACCCGCA GCCCAGGCTA AACTGGCCCA ATCTGCCCAG GCGGTGAGAA ATTTTCGTAA ACAGTATGGT CTAGTTACTC CTGATGCCTA TGCTGAGGCT GTAGTGAGTA CGCGCATGGA GCTAGAGAAG CAAGGCAAGG ATGCTGAAAT TGCAGTCAAG ACCACACAAC GCCAGTTAGA GGAGGTCAAT CAGCAACTTG CCGATCTGAA AGTGAACCCC TCTCAGGCGG TGCCCATCTC TGTGCTGCTC CAGGATAGCA ATTATCAAAA ACTGACCACT CGACTGCAGG AAGTAGAGCT GAGCCTGGCT CAACAAAGCT TAACCCTGCA GAATAATCAT CCTACTATAG AGAATCTGCG AGCGGAGCGG GCCGATCTAT TAAAGCTGAT GCGCCAGCGG GCTAATGGTC TACTCCGAAC TCAGTTGAAC CGGGATCTGA CCACCCTGCC CTCATCAGCA AGCTCCGGCT CATCCGATGG TTCTGTCGTG CAAGGACTGA CCGATAAAGC GCTGGAAGCT CAGATTTCGT TGGCGACCCA GACTGCCCAA CTGAATGGTA TCCGTCAGGC CCAACAACAA GTCGCTGAGC GGTTTCAGGC GCTTCCCCAG TTACAGCAGC AATATGCTGA ATTGCAACGG CAACTCAAAG TCAATGAGGA CGTTGTCGGG CGCTTTATGG AGAGGCTGCA GGAACTCCGC ATTGCCGAAG CTCAACGGAC CACTTCCTGG CGGGTGCTGG AACCGGCCTA TCTACCGACA GCCCCAATCT CTCCCAATAT GTCGCGGGCC ATTTTGCTGG GGCTATTTGC TGGAGTTCTG GCCGGCATTG GGTTGGCTCT GTTGATTGAA CGGTTAGACT CCCGTATCCA TTCCGTGGAA GAAGTCAAAC GGGCCAGTGG GTTGCCTCTG TTGGGTACGG TTCCCCGCAG CCGCTCCTCC GAGCCTCACA AAGACACTGA TTCTCCCTTT GTTGAAGCGG TTCGTTCCTT AGGGTTGAAC TTGCGTTATC TCAGCCCGGA CACCGAGCTT CGCACGATCG CCTTTACCTC TACCATTCCC AGTGAAGGGA AATCGACGAT CGTTTACAAT TTGGGGCGGA TGTTGGCAGA ACTGGGGCAA AAGGTGTTGA TTGTCGATGC TGACACCCGT AACCCCACGA TCCATCAAAT TATTGAACAA CCCAATTTGC GGGGGTTGAC GACTGCAATC GCCTCGGATA AGTCCTGGCA GGAAATGCTC ATCCCTGGGG GTGTCACCAA CCTTGATATT CTCACTGCTG GTTTTCGACC TCCTAACCCG ATCGCCCTGC TGGATTCCTA CAAAATGGTT GGGTTGATCG ATGAGTGGCG CCAACACTAT GATTACATTC TGGTTGATAC ACCGCCGGTG CTGGGGGTGC CTGATATTCA GTCGATCGGG TGCCGGTTTG ATGGAGTCGT GATGCTAGTG GCGATGAACG GCCCCACCAC TGCTGCCCTC ACCCGCGCTG TAGAAATTCT CCGTGGCAGC CGTAGTAATC TCCTAGGGGT CGTTGCTAAC ATGCTCGATC GGGAACATAC CGGTGGCTAC TACTATTATT CTTACTACTA CCAGTACTAC AGTAAGGATG GAGAACAGGA TGGCCCCGCT GCTAAGGGTA AGCCGGCCAG TGATGAAGTG GAAGTGCTCT CCGATGCCAA TCCGCTGAAA TAA
|
Protein sequence | MVQFNAERWL QNQQLLNELY FSASDKVELL RTLKKRWIPA LATAVTVFAG CYIYSALQTP LYRSEALILT GKEQSTPLGE EINSTSSYSN WSNPLINEIQ VLQSSSLVTK AQQQLKPPHN KTSVGSIAGG LSITQVGDSD VLKVTYTGTD PKTVQAILDA LNKTYIDYSL EKRRSQVSSG VRFIEEQLPA AQAKLAQSAQ AVRNFRKQYG LVTPDAYAEA VVSTRMELEK QGKDAEIAVK TTQRQLEEVN QQLADLKVNP SQAVPISVLL QDSNYQKLTT RLQEVELSLA QQSLTLQNNH PTIENLRAER ADLLKLMRQR ANGLLRTQLN RDLTTLPSSA SSGSSDGSVV QGLTDKALEA QISLATQTAQ LNGIRQAQQQ VAERFQALPQ LQQQYAELQR QLKVNEDVVG RFMERLQELR IAEAQRTTSW RVLEPAYLPT APISPNMSRA ILLGLFAGVL AGIGLALLIE RLDSRIHSVE EVKRASGLPL LGTVPRSRSS EPHKDTDSPF VEAVRSLGLN LRYLSPDTEL RTIAFTSTIP SEGKSTIVYN LGRMLAELGQ KVLIVDADTR NPTIHQIIEQ PNLRGLTTAI ASDKSWQEML IPGGVTNLDI LTAGFRPPNP IALLDSYKMV GLIDEWRQHY DYILVDTPPV LGVPDIQSIG CRFDGVVMLV AMNGPTTAAL TRAVEILRGS RSNLLGVVAN MLDREHTGGY YYYSYYYQYY SKDGEQDGPA AKGKPASDEV EVLSDANPLK
|
| |