Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cyan7425_4089 |
Symbol | |
ID | 7290038 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cyanothece sp. PCC 7425 |
Kingdom | Bacteria |
Replicon accession | NC_011884 |
Strand | - |
Start bp | 4124788 |
End bp | 4125408 |
Gene Length | 621 bp |
Protein Length | 206 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 643587062 |
Product | CRISPR-associated protein, Cse3 family |
Protein accession | YP_002484764 |
Protein GI | 220909453 |
COG category | |
COG ID | |
TIGRFAM ID | [TIGR01907] CRISPR system CASCADE complex protein CasE/Cse3 |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.208178 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTATCTCT CAAAGTTAGT TCTAAATGAA CGCGATCGCA CCGTTCAGCG GGATCTCAGC AACGTCCATG CCCTACATCA GCGGATCATG CAAGCCTTTC CTGACGAACA GCGAGAAAAT CCTCGTGCTG ACTGGAATGT ATTATTTCGG CAGGAGCCGG ACATCAGCAT TGTCTTAGTT CAATCGGAAA TTGAACCCAA TTGGACACAT TTATCCTACA ACTACCTGCT CCAGCCACCC CAGCTCACAT CCGTTAATTT TGTGACCAGT CGTTTAGAAC CGGGACGAGC ATTTCAATTT CGCTTGAAAG CTAATCCCAG CAAACGCGAT AAACAAAGTC GCAAACTCAT TGGCATGTTT CATCAGGCAG ATCAGATTGC ATGGCTGGAA CGGCAAGCAG AGCAGCGTGG CTTTAAGCTG CTAGGGGTAG ATGTGATTCC CACCCCCAAT GTGTTTGGAA TGAAAGAAAA AGGCAAGCCA CCGATCCAAA TTCTCACTGT GATGTATCAA GGCATCTTAC AAATAACTGA TTCTGCCCCA TTCATCAACG CTATACAACA AGGGATTGGG CGGGGGCGTT CCTACGGTTG TGGTCTGCTG TCGATCGCCA GAGTCAACTA A
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Protein sequence | MYLSKLVLNE RDRTVQRDLS NVHALHQRIM QAFPDEQREN PRADWNVLFR QEPDISIVLV QSEIEPNWTH LSYNYLLQPP QLTSVNFVTS RLEPGRAFQF RLKANPSKRD KQSRKLIGMF HQADQIAWLE RQAEQRGFKL LGVDVIPTPN VFGMKEKGKP PIQILTVMYQ GILQITDSAP FINAIQQGIG RGRSYGCGLL SIARVN
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