| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cyan7425_3575 |
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| Symbol | |
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| ID | 7289517 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cyanothece sp. PCC 7425 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011884 |
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| Strand | + |
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| Start bp | 3530494 |
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| End bp | 3532500 |
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| Gene Length | 2007 bp |
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| Protein Length | 668 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 643586549 |
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| Product | squalene/oxidosqualene cyclase |
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| Protein accession | YP_002484257 |
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| Protein GI | 220908946 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1657] Squalene cyclase |
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| TIGRFAM ID | [TIGR01507] squalene-hopene cyclase
[TIGR01787] squalene/oxidosqualene cyclases |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.224012 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGATCA GAGCAACCGT TGACACCGCC AAACTAGAAA AGGCGATCGC TGCCAGTCAG
GAGCATTTGT TATCAACCCA ATACCCGGAA GGCTACTGGT GGGCTGAACT GGAATCGAAT
GTAACGATGA CGGCGGAGGT GGTGCTGCTA CATAAGATCT GGAAAACGGA TGGCACACGC
CCGATGCACA AGGCTGAGAA ATACCTGCGA TCGGAGCAAC GGGAGCATGG CGGCTGGGAA
CTCTTTTATG GCGATGGCGG GGATCTGAGC ACCTCCGTAG AAACCTATAC AGCGTTGCGC
CTCCTGGGGG TTCCGGCCAG CGATCCGGCC CTGCTCAAAG CCAAAGATTT TATTTTGCGT
CGAGGTGGAA TCAGCAAAAC CCGGATTTTC ACCAAGCTGC ACCTGGCCCT GATTGGCTGC
TATGACTGGC GGGGACTGCC TTCCCTTCCC CCCTGGGTGA TGTTATTACC CGAAAACTTT
CCCTTCACCA TTTATGAACT GTCCAGTTGG GCGCGGGGTA GTACCGTACC GTTGCTGATC
GTGATGGATC GCAAACCTGT TTTTTCGGTT AATCCACAAA TTAATGTTGA TGAGTTGTAT
GCCGAGGGTC GCGATCGGGT CAAGTTTGAG CTGCCTCGCA AAGGAGACTG GACGGATTTG
TTTATTGAAC TGGATGGCTT GTTCAAATTT ACTGAACAAA ATAATCTGGT TCCGTTTCGG
GAAGAGGGCT TAAGGGCGGC GGAACGCTGG GTGCTGGAAC GTCAGGAGGC CACAGGGGAT
TGGGGTGGCA TTATTCCTGC CATGCTCAAT TCTCTGCTGG CACTGCGGGC CCTGGGTTAT
CATCCGGCTG ATCCCTATGT GCGGCGGGGC ATGGCGGCGG TGGATCGGTT TGCGATCGAA
ACGGCTGACA CCTATCGCGT TCAACCCTGT GTTTCGCCCG TTTGGGATAC GGCTCTGGTG
ATGCGGGGCT TAATCGATTC TGGCTTGCCT GCGGATCATC CGGCGATCGT CAAGGCTGGA
GAATGGCTGC TGGAAAAACA AATTCTGGCC TATGGGGATT GGGCGGTAAA AAATAAAACT
GGGCAACCGG GAGCCTGGGC GTTTGAATTT GAAAATCGCT TTTACCCCGA TGTGGATGAC
TCCGCAGTGG TGGTTATGGC CCTGCAGGCC GCTCAACTCC CAGATGAAGA CCTCAAACAA
CAGGCGATCG AGCGCTGTGT GAAATGGATT GCGACCATGC AGTGTAAACC GGGGGGGTGG
GCAGCCTTTG ATGTCGATAA CGATCAGGAC TGGCTGAACC AGATTCCCTA CGGCGACCTC
AAAGCCATGA TCGATCCGAA TACAGCGGAT GTCACGGCAC GGGTGCTGGA AATGATCGGC
CGCTCTGGGG TGACGACGGG TGAGGCCAGT GTGGAGCGAG CGCTGGCTTA TCTGCGGCGG
GAACAGGAAG TAGAAGGTTG CTGGTTTGGG CGCTGGGGGG TGAACTATAT CTATGGCACC
AGTGGGGTTT TAGCTGCACT GGCCTTAATT GCTCCCAAGT CTGACCATGC CATGATCCAG
CGGGGGGCCG ACTGGTTAGT GCGTTGTCAG AATGCTGATG GAGGTTGGGG CGAAACCTGC
CGCAGTTACA ACGATCCCCA TTTGAAAGGA CAGGGACCAA GTACCGCCTC CCAAACCGCC
TGGGCCTTAA TTGGGTTATT GGCAGCGGGA GAAGCCACGG GAGAGTTTGC CTGGGGGGCG
ATCGATCGGG GAATCAACTA TCTGCTAGCC ACCCAGCAGC AAGATGGCAG ATGGGATGAA
GATTGGTTTA CCGGCACGGG CTTCCCCGGC CACTTTTACC TCAAGTACCA CCTCTATCAA
CAACACTTTC CCTTAACCGC TCTGGGGCGC TACAGCAGCC TGACAGGACT AAAACAGGAA
TTAAAGATTC CTTTGCAGTT AAAATCGAAA CCTGAAGTCG TGATGATTGA GGATAGCGAT
TTGCTAAGTG ACGAAGATGC TACTTAA
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| Protein sequence | MQIRATVDTA KLEKAIAASQ EHLLSTQYPE GYWWAELESN VTMTAEVVLL HKIWKTDGTR
PMHKAEKYLR SEQREHGGWE LFYGDGGDLS TSVETYTALR LLGVPASDPA LLKAKDFILR
RGGISKTRIF TKLHLALIGC YDWRGLPSLP PWVMLLPENF PFTIYELSSW ARGSTVPLLI
VMDRKPVFSV NPQINVDELY AEGRDRVKFE LPRKGDWTDL FIELDGLFKF TEQNNLVPFR
EEGLRAAERW VLERQEATGD WGGIIPAMLN SLLALRALGY HPADPYVRRG MAAVDRFAIE
TADTYRVQPC VSPVWDTALV MRGLIDSGLP ADHPAIVKAG EWLLEKQILA YGDWAVKNKT
GQPGAWAFEF ENRFYPDVDD SAVVVMALQA AQLPDEDLKQ QAIERCVKWI ATMQCKPGGW
AAFDVDNDQD WLNQIPYGDL KAMIDPNTAD VTARVLEMIG RSGVTTGEAS VERALAYLRR
EQEVEGCWFG RWGVNYIYGT SGVLAALALI APKSDHAMIQ RGADWLVRCQ NADGGWGETC
RSYNDPHLKG QGPSTASQTA WALIGLLAAG EATGEFAWGA IDRGINYLLA TQQQDGRWDE
DWFTGTGFPG HFYLKYHLYQ QHFPLTALGR YSSLTGLKQE LKIPLQLKSK PEVVMIEDSD
LLSDEDAT
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