| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cyan7425_3556 |
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| Symbol | |
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| ID | 7289493 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cyanothece sp. PCC 7425 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011884 |
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| Strand | - |
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| Start bp | 3504593 |
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| End bp | 3507310 |
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| Gene Length | 2718 bp |
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| Protein Length | 905 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 643586525 |
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| Product | diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) |
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| Protein accession | YP_002484238 |
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| Protein GI | 220908927 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.88325 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.39495 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGAATTC GAAATTTTTT AATGCGAGTT CAGACGAGGC TTTTCATACT CCTGACAGCA
GTGGTTGCTT TGACCGTAGT GGGTATACGC TCCATTGACA CAACAGAGAG ACAGCGGTTG
TTAACCATTG CCAATGGCAT GGAACAGGAT CGCAATGTTT TTTTTCGTCA ACTGATCAAG
TTGAAGGGTG AGTCTCTGGA GAATTTCGTC CACAACTATA CCTACTGGGA CGAACTGATT
CAGTTTACCA AGGCTCCTGA TCCGAAATGG GCCAGGGATC AACTAGAAGC TAGTATGCCT
TCCTTCAAGC TGGATGGTAT CTGGGTTTAT AACCTGAATA AGAAACTCGT TTATGCCACC
GTCAATCGGT CCAGTCCGTC AAATCCTCCA GCATTGCCTC TGCCAGACCG GGATTTGGTA
GCCTTTCTGC AACTCCTCCA CCGGCAACGG TTTGCCCATT TTTTTGTTCA AACGCCTCAA
GGGTTATTAG AAGTTCGGGC TGCAACCATT CATCCTTCCG ATGACCCTGA ACACCGTACG
GCTCCTCAAG GTTACTTTCT GGCCGGCCGT CTTTGGTCTA AACAATTCCT GACCCATCTT
GGGAGTATGG TCCACGCCCA GATTGAGCTG CTCCCACCGG ACCACCAACC TTTGAGTAAG
CTAAGCAAGC TGGATGTACA GCAGGGTATC CTGACTAATC TCAGTCCCTT AAGAGGTTGG
GATCAGCAGG TGGTTGCCCA GCTCTCGTTT AAGAGTGCTT CGCCGCTGTT AGGCCAACTC
GACGCAGCCT ATGATGATCA GCTTTTGCAG GCCGTTGTTG TGGGTGGACT CATGTGTCTG
ATCTTGCTGT TTGCCCTTGT CGTCTGGGTG GTTTTGCCGT TGCGATCGCT CTCTCAAGCC
CTGGTGGTGG AGGATGCATC CTTGATTCAC AAGCTCAGCA CGGCAAAGAC AGAGTTTGGT
GAACTGGCCC AACTGATTCT GAAATTCTTT CACCAAAAAG AACTGCTACT GTCTGAGATT
GCTGTACGGA AGTCGGTGGA AACCGAGCTA CGCCAAAGTG AAGAACGCTA TGTCCTGGCA
GCGGCGGGAG CAAATGATGG TCTGTGGGAC TGGGATTTGC AGCAGAATCA AATTTATTTT
TCTAACCGTT GGAAGTCCAT GCTGGGTTTT GCAGAACTTG AAATTCCCAA TCAGGTTGAG
GCCTGGTTAG AGCGAATTCA CCCGGAGGAT CGAGAGCAGA TGCAGCACTG TTTGCAGGAA
CATCTGGAGG GCAAAAGTGA GCATTTTGAA TATGAGTACC GCATGCGCCT GAAAGACGGC
AGTTACCGCT GGATGCTCTG TCGGGGGTTA GCGGTTCGGG ATCAGGTGGG CCAGGCTTAT
CGCATTGCGG GTTCCCAAAC GGATCTGACC GATCGCAAGG CGCTCTACGA TCCCCTCACC
CATCTGGCTA ACCGTTCTTT ATTGATGGAG CGGCTGCGGC AGGCCATGCA GATCAGAGAA
CGCTATCCTG CTCGTCTCTT CGCCGTTCTG TTCCTGGATC TAGATCGGTT TAAATGGGTG
AACGATAGTC TGGGGCACTG GATTGGCGAT CGCTTGCTGA TTGAAATTGC TGCCCGCCTC
AAAGCCCTCT CCCGTTCTGA GGATACGGTG GCTCGTTTAG GGGGCGATGA ATTTGTCTTG
TTGCTCGCTA ATCTATCTAC GCCAGCTGAG GCGATTGCGG TGGCCAGCCG AATTCAGCAC
ACCCTGGCCC AGGTGTTTGA AATTGAAGGG CACACCATTT ATACCGGCAC CAGCATCGGT
ATTGCCTTTG CAGATCATCT AGAGCAAAAA GGGGAAGAGT TGCTGCAGTA TGCTGATATG
GCGATGTATC AGTCCAAGTC TAGAGGCGGT AATAATGTGC AGGTGTTTGA TACCGCTATG
CGGGTGGGGA CAAGCAACCG GCTAAAATTA GAATTGGAAT TACGCCAGGC CCTTGAGCAG
CAGCAGCTCC TCCTCTACTA TCAACCGATT GTCTGCCTCT CTACGGGAAC ACTGCAGGGA
TTTGAGGCGT TAGTGCGCTG GCAGCACCCC CAGGCGGGCT TACTCTCCCC TGTGGATTTC
CTTCCTCTGG CAGAAGAAAC TGGGCTCATC CTGCCGATCG GAACCTGGAT CCTGCAAACC
GCCTGCAGCC AAATGTACTC CTGGCAACAG CAGATTCAAG CAGACGTTCC CCTCAGCATC
AGTGTGAATT TTTCCACCCG TCAGTTTTTC CACCCGAACT TTTTGCAGCA GATTCAGACC
ATTCTGAGCG AAACGGGTCT AGCACCCCAT TGCTTAAAGC TGGAACTAAC CGAGCACACC
ATGATTGAGG ATGCGGAAAG GGCTGCACGT TTGCTCAGCC AACTTAATGC TCTGGGGATC
GATATCCAAC TGGATGACTT TGGCACAGGG TTCTCTTCCC TCAGCCATCT CCATGAATTT
CCGATTCATA CTCTTAAAAT CGATCGCTGC TTTACCCAGC AGGCTCTGGA CTCGAGCCGG
CATAAGGAAA TTGTTCAGGC GGTGGTAACC CTGGCTCACA ATTTAGGCCT GTCTGTTGTG
GCGGAAGGGA TTGAAACCAA GGCGCAATAC GAACAACTGC GCAACTTAGG ATGTGATTAT
GGGCAGGGCT ACTTTTTTAC CCCTCCTCTG GATTTGTTTC AGGCTACTGC TTGGATGACC
GCATCAGGCT CCCCCTAA
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| Protein sequence | MRIRNFLMRV QTRLFILLTA VVALTVVGIR SIDTTERQRL LTIANGMEQD RNVFFRQLIK
LKGESLENFV HNYTYWDELI QFTKAPDPKW ARDQLEASMP SFKLDGIWVY NLNKKLVYAT
VNRSSPSNPP ALPLPDRDLV AFLQLLHRQR FAHFFVQTPQ GLLEVRAATI HPSDDPEHRT
APQGYFLAGR LWSKQFLTHL GSMVHAQIEL LPPDHQPLSK LSKLDVQQGI LTNLSPLRGW
DQQVVAQLSF KSASPLLGQL DAAYDDQLLQ AVVVGGLMCL ILLFALVVWV VLPLRSLSQA
LVVEDASLIH KLSTAKTEFG ELAQLILKFF HQKELLLSEI AVRKSVETEL RQSEERYVLA
AAGANDGLWD WDLQQNQIYF SNRWKSMLGF AELEIPNQVE AWLERIHPED REQMQHCLQE
HLEGKSEHFE YEYRMRLKDG SYRWMLCRGL AVRDQVGQAY RIAGSQTDLT DRKALYDPLT
HLANRSLLME RLRQAMQIRE RYPARLFAVL FLDLDRFKWV NDSLGHWIGD RLLIEIAARL
KALSRSEDTV ARLGGDEFVL LLANLSTPAE AIAVASRIQH TLAQVFEIEG HTIYTGTSIG
IAFADHLEQK GEELLQYADM AMYQSKSRGG NNVQVFDTAM RVGTSNRLKL ELELRQALEQ
QQLLLYYQPI VCLSTGTLQG FEALVRWQHP QAGLLSPVDF LPLAEETGLI LPIGTWILQT
ACSQMYSWQQ QIQADVPLSI SVNFSTRQFF HPNFLQQIQT ILSETGLAPH CLKLELTEHT
MIEDAERAAR LLSQLNALGI DIQLDDFGTG FSSLSHLHEF PIHTLKIDRC FTQQALDSSR
HKEIVQAVVT LAHNLGLSVV AEGIETKAQY EQLRNLGCDY GQGYFFTPPL DLFQATAWMT
ASGSP
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