Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cyan7425_3404 |
Symbol | |
ID | 7289341 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cyanothece sp. PCC 7425 |
Kingdom | Bacteria |
Replicon accession | NC_011884 |
Strand | + |
Start bp | 3359363 |
End bp | 3361372 |
Gene Length | 2010 bp |
Protein Length | 669 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 643586376 |
Product | ribonuclease, Rne/Rng family |
Protein accession | YP_002484089 |
Protein GI | 220908778 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG1530] Ribonucleases G and E |
TIGRFAM ID | [TIGR00757] ribonuclease, Rne/Rng family |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCAAAAC AAATCATTAT TGCTGAACAG CATCGAATTG CCGCTGTTTT TTCAGAAGAT CAAATTCAAG AGTTAATTGT GGCAACGGGC AGCCATCAGG TTGGTGACAT CTATCTGGGG ATTGTTGAGA ACGTCCTGCC GGGGATAGAT GCTGCCTTTG TCAATATTGG TGACAGCGAG CGCAACGGCT TCATCCATGT CAGTGATTTA GGACCGGTGC GCCTCAAACG GGGAGCAGGT GCAATTACTG AATTACTGAC CCCGCAGCAG AAAGTATTAA TTCAGGTGAT GAAGGAGCCT ACGGGCAGTA AAGGCCCTCG TCTGACGGGC AATATTTCTA TGCCTGGGCG GTATCTGGTC TTAATGCCGT TTGGTCGGGG AGTTAACCTG TCGCGCCGGA TTAAAAATGA AAATGAGCGC GATCGCCTGC GGGCCCTGGG CATTTTGATC AAACCGGCGG GGATGGGCTT GTTGGTCCGC ACGGAAGCCG AGAACGTTCC TGAAAAAGCC ATCATTGAAG ACCTGGAAGC CCTGAAAAAA CAGTGGGAAA CCATTCAGTT GCAGGCCAGC TCCACCCGTG CTCCCGCCTT GCTCGGTCGG GATGATGACT TTATTCAAAG GGTTTTACGG GATATTTACA CAGCAGATGT CAACCGCATC GTGGTCGATT CTTCTCTGGG GCTGAAACGG GTCAAACAAC AGCTCATGAG CTGGAATGGC AATAAGTTGC CTGCTGGCGT GTTGATCGAT CACCATCGCG AGCCCGTGTC GATTCTGGAG TATTTCCGCG TCAACGCAGC GATTCGGGAA GCCCTTAAAC CGAGGGTTGA TCTACCTTCC GGCGGCTATA TCATCATTGA ACCGACAGAA GCGTTAACGG TGATCGATGT CAACTCTGGC TCCTTTACCC GCTCTGCCAC GGCTCGGGAA ACAGTGCTCT GGACCAACTG TGAGGCAGCT ACCGAAATTG CCCGTCAGTT GCGGTTGCGT AATATCGCCG GGGTGATCAT TGTTGACTTT ATCGACATGG ATTCCCGCCG CGATCAACTG CAGGTGCTGG AACACTTCAG TAAGGCGTTG AAAGCGGATA AGTCTCGTCC CCAGATTGCC CAGCTCTCTG AACTCGGTCT GGTGGAGTTA ACCCGCAAAC GGCAGGGGCA AAACATTTAT GAATTGTTTG GTCGCAACTG CCCGACCTGT GGAGGACTAG GCCATCTGGT GCATCTACCC GGAGAGCCAG AAGACAGTAC GGGTGAGCCG ATCGAGCGCT ATATTCCCAG CCGCAACGCA GACTTTGCTC CCAGTCGCCG CACCCCTGAG TTGCCGGAAC CCCGTAGTGA TGAGTTTGAT TTTGAGACCA GTGAAGAACC GGAACTTGAA CTGGTCAACC ATCCCAACTA CCAGGAGCGG GGCAATAACC GTCGCCGCCG CCGCCACCAG CGGGTGAATG ATACGCCCTC CCGTCCCCCC CGTAGCCTGG TTGCCAATCT GCCGACCACC GCTGAACCTG CCGTGGAAGT GAATGGGAAT CCGCCGGTCA ATGGGGAACG ATTGGAGCCG GTGGAACGCA CTCGCCCAAC TCCCGTCACT AAAGTAAAAG CGGAACCCCC AGAAATGATT TCTGTGGTGA TGACAGCGGT AGAACAGGAG GTCTATGCTC TGATGGGCCT TTCGCCCCTG CTGCTTTACA ATGGGACGAT CAAAAATCCC CGTAATGCCA TCGTTTCCGT TTCTTTACCC GGGCAGGAAG CCGTTCCCCC TCCTCCCCCC AGTGCTCCCC GCAAAGATAG TTTGACCGAC GAAAAATCAG CAGCAGAACT TGCCAGTCCG GAAGAAGCCC GTGAACCATC CTTGATGGCA GAAGCTTCGG TGGACCTGGC CAACCCTGAG AACCCTGAGG TAGACAGCGA AGACGAGAGC TCTGCTCCTA GCCGCCGCCG TCGCCGCCGT TCTTCGGCCA ACTCTGCCGA GCAACTTTCC CTGGCAACGG AATCCAATTC TAAGGTTTAA
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Protein sequence | MPKQIIIAEQ HRIAAVFSED QIQELIVATG SHQVGDIYLG IVENVLPGID AAFVNIGDSE RNGFIHVSDL GPVRLKRGAG AITELLTPQQ KVLIQVMKEP TGSKGPRLTG NISMPGRYLV LMPFGRGVNL SRRIKNENER DRLRALGILI KPAGMGLLVR TEAENVPEKA IIEDLEALKK QWETIQLQAS STRAPALLGR DDDFIQRVLR DIYTADVNRI VVDSSLGLKR VKQQLMSWNG NKLPAGVLID HHREPVSILE YFRVNAAIRE ALKPRVDLPS GGYIIIEPTE ALTVIDVNSG SFTRSATARE TVLWTNCEAA TEIARQLRLR NIAGVIIVDF IDMDSRRDQL QVLEHFSKAL KADKSRPQIA QLSELGLVEL TRKRQGQNIY ELFGRNCPTC GGLGHLVHLP GEPEDSTGEP IERYIPSRNA DFAPSRRTPE LPEPRSDEFD FETSEEPELE LVNHPNYQER GNNRRRRRHQ RVNDTPSRPP RSLVANLPTT AEPAVEVNGN PPVNGERLEP VERTRPTPVT KVKAEPPEMI SVVMTAVEQE VYALMGLSPL LLYNGTIKNP RNAIVSVSLP GQEAVPPPPP SAPRKDSLTD EKSAAELASP EEAREPSLMA EASVDLANPE NPEVDSEDES SAPSRRRRRR SSANSAEQLS LATESNSKV
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