Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cyan7425_3274 |
Symbol | |
ID | 7289210 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cyanothece sp. PCC 7425 |
Kingdom | Bacteria |
Replicon accession | NC_011884 |
Strand | - |
Start bp | 3234536 |
End bp | 3237268 |
Gene Length | 2733 bp |
Protein Length | 910 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 643586247 |
Product | DNA topoisomerase I |
Protein accession | YP_002483960 |
Protein GI | 220908649 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0550] Topoisomerase IA |
TIGRFAM ID | [TIGR01051] DNA topoisomerase I, bacterial |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.384669 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCAACTC TGGTTATCGT TGAATCCCCG ACTAAAGCTC GCACCATTCG CAACTACTTG CCCCCGGAAT ACCGGGTTGA GGCTTCTATG GGCCATGTGC GGGATCTGCC CAAAGCCGCC AGTGAAATTC CGGCTGAAGT CAAACAGGAA AAGTGGGCCA ACCTGGGCGT CAATGTCGAA GCTGACTTTG AACCGCTTTA CGTTATTCCC AAGGATAAGA AAAAGATTGT CAAAGAGCTG CAGGATGCTT TGAAGAACGT CGATCGGCTG CTGCTGGCGA CGGACGAAGA TCGGGAAGGG GAAAGTATTA GCTGGCATTT GCTCCAACTC TTACGTCCCA AAGTGCCGGC CCAGCGGATG GTCTTCCATG AAATTACTCA GGAAGCGATT CAGGCGGCCC TGCAGAATTG TCGCGAGATT GATGAACGCC TGGTCCATGC CCAGGAAACC CGACGAATTC TGGATCGGCT GGTGGGTTAT ACCCTGTCCC CGTTGCTGTG GCGCAAAATT CCCCAGGCTA AAGAGACCGA TCGCAAACTG TCCGCAGGCC GGGTGCAATC CGTGGCGGTG CGCTTGCTGG TGAACCGGGA ACAACAACGG CGCTTATTTC GCAAGGGCAG CTACTGGGAC TTGCAGGCCA CCCTGGCGCA ACATCAGTCT CCCTTTGAAG CCCGTCTGGT TAACCTGAAT GGCAAGCGGT TGGCCACAGG CAGTGATTTT GATGAAAATA CGGGGCAGTT GTTTCCCGAT CGGGATGTGG TGCTGCTGAA TGAAACCCAG GCCCAGGAGT TACAGGCTCG GCTGCAGGAA CAAACTTGGC GGGTGACCCA GCTGGATGAA CGCCCCCAAA CCCGCAAACC CGCTCCTCCC TTTACCACTT CCACGCTGCA ACAAGAGGCT AACCGCAAAC TCCGACTGTC TGCCAAGGAT ACGATGCGGA TTGCCCAGGG GCTGTACGAA CGTGGTTTTA TCACCTACAT GCGGACGGAC AGTGTGCATC TGTCGGAACA GGCGATCGCC GCCACCCGCA GTTGTGTGGA GCAAATGTAT GGCCGGGAGT ATCTCAGCCC CCAACCCCGC CAGTACACGA CCAAAAGTAA GGGGGCCCAG GAAGCCCACG AGGCGATCCG TCCCGCTGGG AGTAGTTTTC GCGCCCCGCA GCAAACTGGC CTGGAGGGTG CTGATCTGGA ACTGTACGAG CTGATCTGGA AGCGCACGGT GGCCACCCAG ATGGCTGAAG CCCGCCAAAC CTTAATTACG GTGCAGATTC AGGTGGAGAA TGCCGGTTTC CGGGCCAATG GCAAACGGAT TGATTTTCCG GGTTTCTTCC GGGCCTACGT GGAAGGATCG GATGATCCCG ATGCTGCTCT GGAAAACCGC GAAGTGATTC TGCCGCCCCT GCAACCGGGA GATACCCCCA CCTGTCGCAC TCTGGAGGCG ATCGCCCACG AAACCCAACC CCCCGCCCGT TATACGGAAG CCACTCTGGT GAAAACCCTG GAAAGTGAGG GGATTGGTCG TCCCAGTACC TACGCCAGTA TTATCAGTAC CATTATCGAT CGCGGTTATG CTTACCGGCA GGGAAATGCC CTGGTTCCCA CCTTTACCGC CTTTGCCGTC ACTCGCCTGT TGGAAAAACA TTTTCCCGAT CTGGTGGATG TGGGATTTAC CGCCCGGATG GAGCAAACCC TGGATGATAT TTCGACCGGA GGGGTGGACT GGTTGCCCTA CCTGCGGGAT TTTTACCTGG GCGAAAATGG ACTGGAACAC CAGGTGAAGG AGCGGGAGGT GCAAATTGAC CCGGTGGAAG CCCGCACGGT GGAACTGCCT GGCCTGGAGG CTAAAGTGCG GATTGGTCGC TATGGCCCCT TCATTGAAGT GGATAATGGC ACAGAACCCG TTACCGCTTC CCTGCCCCTG GATATCACCC CAGCCAATTT AGACGCGGAT CAGGTGGAAC TGCTGCTGAA ACAGAAGCTG GAGGGGCCAG ATAAGCTGGG AATCCATCCC GAAACGGGGG AGCCGATCTA TCTGCTGCTG GGACCCTATG GGTTTTATGT GCAGTTGGGA GATGTTTCGG AAACCAACAA AAAGCCGAAA CGGGCGGCAC TGCCCAAGGG GGTGGATAAA GCGGAGGTCA ACCTGGGCCT GGCCCTCGAT TTGCTTTCCA TGCCCCGTGC TCTCGGTTTA CATCCTGAAA CCGGCGGCAA GATCAGTGTG GGGTTGGGAC GGTTTGGCCC CTATGTCCTC CACGATCAGG GCAAGGATAA TAAAGAGTAT CGATCGCTGA AAAAAGAGGA TGATCCGTTT ACACTTTCCC TGGAACGGGC CCTGGCGTTG CTGGCGGAAC CGAAAACGGG GCGGGGCAGA CGGAGTAAAA CGAAGGAACC GCTACGGGAG TTAGGCCCTC ATCCGGCTGA TGGGGAACCG ATTCGCCTGT TTAATGGTCC CTACGGCCCC TACGTTAATC ACGGCAAAGT GAATGCTTCG TTGTCGGAAG GGGAAGCACC GGAAACCGTG ACCCTGGAGA CGGCCCTGCA ACTGCTGTCC TCGAAAGAAT CGACGAAGAA GGGAACGGCA AAATCCAAGG GAACCAAAAC CTCCAAAGCG GCCATCGCTG CCTCCACGAC CACCAGCAAA AGCAGCAAGG CCAGTGGCAA AACAACGAAG ACCACCAAGA CCACCAGCCG CAAAAGTAGC TCAAGTCAAT CTACAACTAG CAAAAATAGC TAG
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Protein sequence | MSTLVIVESP TKARTIRNYL PPEYRVEASM GHVRDLPKAA SEIPAEVKQE KWANLGVNVE ADFEPLYVIP KDKKKIVKEL QDALKNVDRL LLATDEDREG ESISWHLLQL LRPKVPAQRM VFHEITQEAI QAALQNCREI DERLVHAQET RRILDRLVGY TLSPLLWRKI PQAKETDRKL SAGRVQSVAV RLLVNREQQR RLFRKGSYWD LQATLAQHQS PFEARLVNLN GKRLATGSDF DENTGQLFPD RDVVLLNETQ AQELQARLQE QTWRVTQLDE RPQTRKPAPP FTTSTLQQEA NRKLRLSAKD TMRIAQGLYE RGFITYMRTD SVHLSEQAIA ATRSCVEQMY GREYLSPQPR QYTTKSKGAQ EAHEAIRPAG SSFRAPQQTG LEGADLELYE LIWKRTVATQ MAEARQTLIT VQIQVENAGF RANGKRIDFP GFFRAYVEGS DDPDAALENR EVILPPLQPG DTPTCRTLEA IAHETQPPAR YTEATLVKTL ESEGIGRPST YASIISTIID RGYAYRQGNA LVPTFTAFAV TRLLEKHFPD LVDVGFTARM EQTLDDISTG GVDWLPYLRD FYLGENGLEH QVKEREVQID PVEARTVELP GLEAKVRIGR YGPFIEVDNG TEPVTASLPL DITPANLDAD QVELLLKQKL EGPDKLGIHP ETGEPIYLLL GPYGFYVQLG DVSETNKKPK RAALPKGVDK AEVNLGLALD LLSMPRALGL HPETGGKISV GLGRFGPYVL HDQGKDNKEY RSLKKEDDPF TLSLERALAL LAEPKTGRGR RSKTKEPLRE LGPHPADGEP IRLFNGPYGP YVNHGKVNAS LSEGEAPETV TLETALQLLS SKESTKKGTA KSKGTKTSKA AIAASTTTSK SSKASGKTTK TTKTTSRKSS SSQSTTSKNS
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