Gene Cyan7425_3270 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCyan7425_3270 
Symbol 
ID7289206 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCyanothece sp. PCC 7425 
KingdomBacteria 
Replicon accessionNC_011884 
Strand
Start bp3230103 
End bp3232493 
Gene Length2391 bp 
Protein Length796 aa 
Translation table11 
GC content54% 
IMG OID643586243 
ProductPAS/PAC sensor hybrid histidine kinase 
Protein accessionYP_002483956 
Protein GI220908645 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase
[COG3437] Response regulator containing a CheY-like receiver domain and an HD-GYP domain 
TIGRFAM ID[TIGR00229] PAS domain S-box 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.498059 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCAGCA GGAACATAGG GTTGAAACTT GACCGAACAG TCCTCACGGG AGAGCGGCTG 
CTTCCCTATG GCATTGCCCT GGGTTCGGTA GCTCTGTCCC TGGGTATCAG TCTGCAGTTG
GGCAGCTTGA TTAAACCGAT GCCAGCCTCA TTGTTCTTCC TGGCCGTGAT GGTAAGCGCC
TGGTATGGCG GTCTGAAGCC GGGTCTGGTG GCCACTGTTG TATCAACCTT CGCCATAAGC
TACTACTTCA TTCCACCCTA CGGTTCTCTC AGAATTACTG ACCTGCATAC GTTATTCCGC
TTAGGGGTGT TTGTGCTCGT TGCCCTGTTA ACCAGTAGTT TAAATGAGTC CCGCCGGATT
GCCCTGCGCC ATGCCGAGAT TATGCGCCGC AGGAGTGAAG CCGCTCAAGA GGAAGTCCAG
GCAACTAAGC AACATTTAGA AAGGGTTCTG TGCAGCATCC ATGATGGATT TTATGTCCTC
GATCGCCATT GGCGCTACAC CTACGTCAAC GATCGCTATT GTGAAATGGC GGGAATGCAG
CGAGAGGCGA TCCTGGGTGA GAACCTGTGG CAGCTCTTTC CGGATGGTGT GGATACCCTC
TTTGACCATC ATCTCCAGCG GGCGATAGAC AAGCAAATCC CCCTGCAGTT TGAGTATTTT
TATGGGGCCT GGCAGCGCTG GTATGAGCAC CGGGTCTATC CTTCCCCAGA TGGAATAACG
GTTTTTGTGA ATGAAATTAC GGACCATAAA CAAGTCCAAG TGGCCCTGCG CCAGAGTCAG
GAACGATTTC GGATCAGTCA GGAACTCTCC CTGGATGCCT TTACGATTCT GAATAGCGTT
CGGGACCAAA CTGGCACGAT CGTCGATTTT GTCTGGATCT ATGCCAACCC CAAAGCGGCT
GAGATTCTGC AGTATTCAGT TGATCAGCTG ATTGGTCAAC GTTTACTCGA TCTGCTGCCC
GGCAATCAAA CCAACAGCGA CCTGTTTGAC CGCTATGTGC GCGTGGTGGA AACGGGCGAA
CCCCACGATA TTGAACTTGC CTACAATTCC GAGGGTATTT CTGGCTGGTT CCGGAACATG
GCGGTGAAGT TAGAGGATGG AGTAGCCATT TTCTTTAGCG ACATTACTGA TCGCAAACAG
GCCGAAGCGG AACGCGAACG ATTACTCAAA GAAGCCCAAG CTGCCCGAGC CGAAGCAGAA
GCTGCCAACC GGATCAAAGA CGAATTTCTA GCGGTGCTGT CCCACGAATT GCGATCGCCC
CTCAACCCGA TTCTGGGCTG GACCCAACTG ATGCAATCCC AACGCTTTGA TGCTGCTAAA
ACCACGGAAG CCCTGGCCGC GATCGAACGC AATGCTAAAC TCCAGACCCA ACTGATCGAT
GACCTGCTCG ATGTTGCCAA AATTCTGCGC GGCAAAATGA GCCTGAATCG CGTCCCAGTT
AATCTGATGT TTGTGATCAA AGCGGCGATC GACATTGTCA TGACTGCAGC AGTTGCTAAA
TCAATCCAGT TGCATTCAGA GTTAGCTCAA ATTGGAGCGG TCTATGGCGA TGCCGGACGG
CTACAGCAAG TGATCTGGAA CCTGCTCTCC AATGCGATCA AATTTACGCC TGCCGGTGGA
CGGGTAGAGA TCCGGCTGAA ACGAGTCGAG CAGCAACTCT ATCAGCCCCA ACCCAACAGC
CTCCCCTCCA TTCACCCCTT ACCCACCACT CCCTATGCCC ACATCACCGT TAGTGACACC
GGCAAAGGAA TTAACCCCAA CTTTCTCCCC TATATCTTCG AGTCCTTTCA CCAGGAGGAT
GCGTCCATCA CCCGTAAATA TGGTGGTCTG GGGTTGGGGC TGGCGATCGT CCGCTATCTG
GTGGAAGCCC ATGGGGGGAC CGTCACCGCA GAGAGTCCTG GGGAAGGGCA GGGAGCGACC
TTTACGGTTT GCTTACCCTT ACTGGATGCG GAGCCAGACA TCCATCAGAC GGACAGCCCC
TCAGAGCCAG AATTAGATCT GAGCGGGATT CGAGTCCTCA CGGTCGATGA TCAGCCGGAT
ACGGGAGAGT TGCTCAACGT CGTCCTGACC CAATACGGTG CCAACGTTTT AACCGTGACC
TCCGCTGCGG AAGTTCTGCC CGCCCTGGCT TCCTTTCAAC CGGATGTGTT CGTCAGCGAC
ATTGGCATGC CAGAGGTGGA TGGTTACACG CTGCTGCAAC AAATTCGCTT GCTACCACCC
GAACAGGGGG GCCAGGTGCC AGCGATCGCC CTGACGGCCT ATGCGGGAGA GCTCAACTAT
CAGCGGGCCA TGGCGGTCGG ATTTCAAAGG CATCTGTCCA AGCCGGTTGA ACCGAAGGTC
ATAGCCAGGG AAATTGCCTC CCTCATTGTT AAAAGGACAG CAGCTCAGTA A
 
Protein sequence
MTSRNIGLKL DRTVLTGERL LPYGIALGSV ALSLGISLQL GSLIKPMPAS LFFLAVMVSA 
WYGGLKPGLV ATVVSTFAIS YYFIPPYGSL RITDLHTLFR LGVFVLVALL TSSLNESRRI
ALRHAEIMRR RSEAAQEEVQ ATKQHLERVL CSIHDGFYVL DRHWRYTYVN DRYCEMAGMQ
REAILGENLW QLFPDGVDTL FDHHLQRAID KQIPLQFEYF YGAWQRWYEH RVYPSPDGIT
VFVNEITDHK QVQVALRQSQ ERFRISQELS LDAFTILNSV RDQTGTIVDF VWIYANPKAA
EILQYSVDQL IGQRLLDLLP GNQTNSDLFD RYVRVVETGE PHDIELAYNS EGISGWFRNM
AVKLEDGVAI FFSDITDRKQ AEAERERLLK EAQAARAEAE AANRIKDEFL AVLSHELRSP
LNPILGWTQL MQSQRFDAAK TTEALAAIER NAKLQTQLID DLLDVAKILR GKMSLNRVPV
NLMFVIKAAI DIVMTAAVAK SIQLHSELAQ IGAVYGDAGR LQQVIWNLLS NAIKFTPAGG
RVEIRLKRVE QQLYQPQPNS LPSIHPLPTT PYAHITVSDT GKGINPNFLP YIFESFHQED
ASITRKYGGL GLGLAIVRYL VEAHGGTVTA ESPGEGQGAT FTVCLPLLDA EPDIHQTDSP
SEPELDLSGI RVLTVDDQPD TGELLNVVLT QYGANVLTVT SAAEVLPALA SFQPDVFVSD
IGMPEVDGYT LLQQIRLLPP EQGGQVPAIA LTAYAGELNY QRAMAVGFQR HLSKPVEPKV
IAREIASLIV KRTAAQ