Gene Cyan7425_3065 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCyan7425_3065 
Symbol 
ID7288998 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCyanothece sp. PCC 7425 
KingdomBacteria 
Replicon accessionNC_011884 
Strand
Start bp3044063 
End bp3046480 
Gene Length2418 bp 
Protein Length805 aa 
Translation table11 
GC content55% 
IMG OID643586043 
Product3-hydroxyacyl-CoA dehydrogenase NAD-binding 
Protein accessionYP_002483760 
Protein GI220908449 
COG category[I] Lipid transport and metabolism 
COG ID[COG1024] Enoyl-CoA hydratase/carnithine racemase
[COG1250] 3-hydroxyacyl-CoA dehydrogenase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAACCA TGTTTAAGCC ATTCCGAACT GTAGCGGTTC TTGGGGCCGG GGTGATGGGG 
AGCCAGATTG CTGCTCACCT GGCCAACATC GGATTAACAG TGCATCTCCT GGATCTGCCG
TCTCCATCGA ACCCAAAAAA TGCGGCTGTT GAAGCGGCCT TCAAAAAAGC TTTGAAGTTA
TCCCCACCGA TCCTGTTTAG CGAAAAAACA GCGCGGCGGA TTATTCTCGG TAACTACGAC
GAGCACTTCC ACCGTTTAGC CACCGTTGAT TGGGTGATTG AAGCGGTAGT CGAAGATTTA
ACGGTGAAAC AAGACCTGAT GCAGCGGATT GAAGCTGCGG TTCGTCCAGA TACGGTGATC
TCGACCAATA CAAGCGGATT ATCGATTCAA GCCATGGCTG AAGGGCGATC GCTCACTTTC
CGGCAACGTT TTTTAGGCAC TCACTTCTTT AATCCACCCC GTTACCTGAA ACTGCTGGAA
CTGATTCCGA CACCGGATAC CCAGCCAGAG GTGCTGGAAC GCTTGCAATG GTTCGGACGG
CTACATCTGG GCAAAGGCGT GGTGGTGGCC AAGGATACGC CCAACTTCAT TGCCAACCGG
ATCGGCATGT ATATCACGAT GCTGGGACTG CGGGCGTTGA CAGAGGGTGG CTATACGATC
GCCGAGATTG ATACCCTGAC CGGGACCTTA GTTGGCCGCC CAAAATCCGC CACGTTTCGC
ACCGCCGATC TGGTTGGACT GGATACGCTG ATCTATGTTG CCAAACACCT CTATCCGGCG
ATTCCTGAGG ATGAAAGTCG GGAGGTGCTG CGGGTGCCAG AACTGCTGTC CAGACTGGTG
GCAACGGGTG CCCTGGGAGC CAAAACCGGC AAAGGCTTTT ATCAGAAGCA AGCGGGTGAG
ATTCTCTCGC TCAATCCCCA AACCCTGGCC TATGAACCTG CCAAGCCCTT GAACTTGGGG
AACCTGGAAG CGATCGCTAA ATTGCCGAGT CTCAGTGAAC GGTTACAAGC CCTTTACCAG
GATCAGGGCC GGGCTGGCGA ATTTTTCCGC CATACCACTC TCTCCATGCT CGGTTACTGT
GCCCGTCGAC TCCCCGAAAT TGCCAATAGC CCTGCCGAAG TGGATCGGGC GATTCGCTGG
GGGTTTGGCT GGGACATCGG CCCGTTTGAG ATCTGGGACA GCCTTGGTTT TGAAAAAGTG
CTAGCGGATA TGGAGGACAG CGGGATTCCT CTACCCACCT GGATTGCCAG ATTGCGAGAC
GAGGGAGCCA CGGGGTTCTA CCAGAGCGAC ACGGACATTA CCAAACACTG GGATGCCACG
CGGGAAGGCT GTCGCGGAGC TGCCTTTTTC ACGTCTGGTG TCGTGCTTTC TCCCCAGGGG
TCAATTCTGC TGGAAACCCC CACGGATGAA CTTCACCTGA GCGTAATCAA AGCCGATCCC
AATCGCACCC TCTGGCAAAA TGCGGAAGCG GCACTGCTGG ATTTAGGGGA GGGGGTAGTC
CTGTTCGAGT TCCGCTCCAA GGGCAATACC CTCAGTCTCA AGGTGGTGGA AGGACTGACA
GAAGTATTGG AACTGCTGGA AAATGGCGAT TATCGGGGCA TGGTGATCGG CAATGACAGT
GCCAACTTCT CCGGCGGCGC AAATCTGGCG GAAATGGCTA CGATGGCTCA GTCCGGTAAT
TTTGCAGGGA TCGCCCAACT GATTGATCAA TACCAGACCT TACTGCAACG GATTCACTAC
TTCCCGAAAC CAATCGTGGC CGCAATTCAG GGACGGGTAC TCGGAGGTGG TTGTGAACTG
GTGATGGCCT GTCCCCAGGT GGTAGCCGCT GCCGAAACCT ATATTGGGCT GGTGGAATTG
GGAGTTGGTC TGATTCCCGG TGCCGGGGGA ATTATGCGGA TGGTGGCTCG GACAGCGGAA
CGGGCAGCGA GTGAATCTGT TGGCCACATT CAGCCCTTCT TGCGAATCGC CTTTGAAACG
ATCGCCACCG CTAAAGTTTC TGGCAGTGCC GCTGAAGCCC AGGATTTAGG CTTCTTACCT
GCGACAACTC GAATTGTGAT TAATGGTGAT CGCCGCTTGT TTGTCGCTAA AGAGGAGGTG
CTGCGACTGG CAGAAGAAGG CTATGCTCCA CCCCCAGCAG CCAACGCGCT CATGGTTCTC
GGTCGTCCTG GCCGCGCCAT GCTCGATCAC GCTGCCTATG TCTTCCAGCA AGGGGGCTTT
GCCAGTGACT ACGATCGCTA CCTGGCTAAC CGTTTGGCCT ACGTGATCAC CGGCGGGGAA
CTGACTGCAC CGGCATTCGT AACCGAAGAC TATCTTTTGC AACTGGAACG GGAAACGTTT
TTACCCCTGT TGAGCCAACC CAAAACTCAG GAGCGGATTG CTCACATGCT CAAGACGAAA
AAGCCACTCA GAAATTAA
 
Protein sequence
MKTMFKPFRT VAVLGAGVMG SQIAAHLANI GLTVHLLDLP SPSNPKNAAV EAAFKKALKL 
SPPILFSEKT ARRIILGNYD EHFHRLATVD WVIEAVVEDL TVKQDLMQRI EAAVRPDTVI
STNTSGLSIQ AMAEGRSLTF RQRFLGTHFF NPPRYLKLLE LIPTPDTQPE VLERLQWFGR
LHLGKGVVVA KDTPNFIANR IGMYITMLGL RALTEGGYTI AEIDTLTGTL VGRPKSATFR
TADLVGLDTL IYVAKHLYPA IPEDESREVL RVPELLSRLV ATGALGAKTG KGFYQKQAGE
ILSLNPQTLA YEPAKPLNLG NLEAIAKLPS LSERLQALYQ DQGRAGEFFR HTTLSMLGYC
ARRLPEIANS PAEVDRAIRW GFGWDIGPFE IWDSLGFEKV LADMEDSGIP LPTWIARLRD
EGATGFYQSD TDITKHWDAT REGCRGAAFF TSGVVLSPQG SILLETPTDE LHLSVIKADP
NRTLWQNAEA ALLDLGEGVV LFEFRSKGNT LSLKVVEGLT EVLELLENGD YRGMVIGNDS
ANFSGGANLA EMATMAQSGN FAGIAQLIDQ YQTLLQRIHY FPKPIVAAIQ GRVLGGGCEL
VMACPQVVAA AETYIGLVEL GVGLIPGAGG IMRMVARTAE RAASESVGHI QPFLRIAFET
IATAKVSGSA AEAQDLGFLP ATTRIVINGD RRLFVAKEEV LRLAEEGYAP PPAANALMVL
GRPGRAMLDH AAYVFQQGGF ASDYDRYLAN RLAYVITGGE LTAPAFVTED YLLQLERETF
LPLLSQPKTQ ERIAHMLKTK KPLRN