| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cyan7425_2723 |
|---|
| Symbol | |
|---|
| ID | 7288657 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cyanothece sp. PCC 7425 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011884 |
|---|
| Strand | - |
|---|
| Start bp | 2677119 |
|---|
| End bp | 2678834 |
|---|
| Gene Length | 1716 bp |
|---|
| Protein Length | 571 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 643585711 |
|---|
| Product | protein of unknown function DUF1400 |
|---|
| Protein accession | YP_002483430 |
|---|
| Protein GI | 220908119 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG4188] Predicted dienelactone hydrolase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.128578 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.00368016 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGACCTACC CTTTCCCCAA ACTGACCCTG CGGTTCTCCT CTTCCTGGCT CTCTAGATTG
AGCATCCTCT TCAGCCTCTG GGCAACCCCT ACCCTGGCGG CAGATCAGGT CTCCCTGAAT
TTCTCCAATC TGAATACCAC GATCAATGTG CCCGTGAGTG CGCTGGAAAC CTTTGCTCAA
ACTGGGCAAC TGAGTGGTAA CCTGGCCGCT TATGCTCAAC TTGCCCCTCC AGGTGCGCTG
AACAATTTTA GAACACTTCT CCAGCAGAAC TTTCAGATGA CCCCTACCCT GGTGAGCCAG
TTTTCCAAAA CGGTAACGGG TCAATTACTG TTTCGATCCT TGGGCGAGTT TTTTCAGACC
AAGGATAATC AAAATGGCCA GTCTGCCCTG GTGGTTGCCT TTACCCAAGC TGCGGCTAAT
CCCAAGGGGC TGACGGTGCT GGATGTGATC CGGCAGTTTC CTGGTTCAAC CGTCAACATC
AATGGACAAA TGTCCTTTCG GGCTGTGAAG TCCCTGGGCC AAACCTTGAA CGATCGCTCT
GTCATTTTTG CCGAGATTCA GAAGTTGGCC CAAGCCAGTT CGTCTACACC CGTTTCACCT
CAACCGGATT TGAGCCAGCC GGGGTCAACC CCATGGATCA AGCAAACGCT GAATGTCGAT
GCAAAGTCCT TTGGCTTGGC CCAGCCCGTT CCTGTTGATT ATTACTTACC CCAGGGATTG
AAGGCTCCTG CCCCCGCGAT TGTGATTGCC CACGGCTTTG CCTCCAGTCG GGAAACGTTT
GCTTATCTGG CTCAACACCT CGCTTCCCAG GGCTTTGCGG TGGTTGTGCC CACATTCCCT
TACACAGATG GCCAATGGAT ATCCGCTTTC TTGAATAACA CGGTGACGTC ACCCTCTGGG
GTTGATATTG CCACTTCAAT GCTGCGTCGT CCCCGTGCAA TTACACTGTT ACTGAATGAT
CTGGAACAGA AAGTCAAGAC TAATGCTGCC TTCAAGCTCG TCAATCCCCA GCAGGTTGGC
ATCCTGGGGC AATCCCTGGG GGGGTACACC GTTTTGGCCA GTGCTGGAGC CAGCCTTAAT
TTTGTCGAGA TTAAACAACA ATGCAATTTA ACCAATTTTG AAAAACTGGT TCTCAGTTTT
AACCTGTCTT TGTTGTTTGA GTGCCAACTG GTCAATGCCC CCAAAAAGCT GAACAACATG
GATTTAACGA ATCCGAATCT GGGCGACCCA CGGGTTAAAG CCGTGATTGC GATCAATCCC
CTCACCAGCC TTGTCTTTGG CCAGCAGGGT ATGAGCCAGA TTAAGATTCC GACCATGCTC
ATTGCCGGCA GTGACGATAT TTTTGCCCCA CCTGTACCGG AACAAATCTA TCCCTTTACC
TGGCTGACCA CCCCCAACAG GTATCTTTTT CTTCTGAAGG GAGGAACCCA CTTTTCTTTC
CTGGGGGATG ACACATCTAA GGGTGGATTG CCGGTCCCGG CTGAAATGAT TGGCCCTAAC
CCAACCCTGG CCCGGCCATC CTTAAAGGCG ATCAGCACCG CTTTCTTCCG AGGCTATCTT
GCTAACCAAC CCCAATATCT CCCTTACCTC AATCAGTCTT ATCTGCAACC GCTAGTGCCC
CAGCCCTTTG GCGTGAATTT TATCAATTCC CTCACCACTG AGCAGTTGCA ACAGGCTATT
TCTGCGGCGG CTACTACATC TACCAAATCC AAATAG
|
|---|
| Protein sequence | MTYPFPKLTL RFSSSWLSRL SILFSLWATP TLAADQVSLN FSNLNTTINV PVSALETFAQ
TGQLSGNLAA YAQLAPPGAL NNFRTLLQQN FQMTPTLVSQ FSKTVTGQLL FRSLGEFFQT
KDNQNGQSAL VVAFTQAAAN PKGLTVLDVI RQFPGSTVNI NGQMSFRAVK SLGQTLNDRS
VIFAEIQKLA QASSSTPVSP QPDLSQPGST PWIKQTLNVD AKSFGLAQPV PVDYYLPQGL
KAPAPAIVIA HGFASSRETF AYLAQHLASQ GFAVVVPTFP YTDGQWISAF LNNTVTSPSG
VDIATSMLRR PRAITLLLND LEQKVKTNAA FKLVNPQQVG ILGQSLGGYT VLASAGASLN
FVEIKQQCNL TNFEKLVLSF NLSLLFECQL VNAPKKLNNM DLTNPNLGDP RVKAVIAINP
LTSLVFGQQG MSQIKIPTML IAGSDDIFAP PVPEQIYPFT WLTTPNRYLF LLKGGTHFSF
LGDDTSKGGL PVPAEMIGPN PTLARPSLKA ISTAFFRGYL ANQPQYLPYL NQSYLQPLVP
QPFGVNFINS LTTEQLQQAI SAAATTSTKS K
|
|---|
| |